Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
CHD1O14646 MTCO1P14-201ENST00000441695 1559 ntBASIC3.32□□□□□ -1.88
CHD1O14646 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD1O14646 RPS15AP12-201ENST00000419498 388 ntBASIC3.32□□□□□ -1.88
CHD1O14646 SDCBPP3-201ENST00000419629 891 ntBASIC3.32□□□□□ -1.88
CHD1O14646 AC012498.1-201ENST00000424037 437 ntBASIC3.32□□□□□ -1.88
CHD1O14646 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.32□□□□□ -1.88
CHD1O14646 AL590762.3-201ENST00000436372 640 ntBASIC3.32□□□□□ -1.88
CHD1O14646 HMGB1P31-201ENST00000437242 427 ntBASIC3.32□□□□□ -1.88
CHD1O14646 RPL23AP58-201ENST00000440453 469 ntBASIC3.32□□□□□ -1.88
CHD1O14646 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHD1O14646 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHD1O14646 RNU6-582P-201ENST00000362989 107 ntBASIC3.31□□□□□ -1.88
CHD1O14646 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.31□□□□□ -1.88
CHD1O14646 AL021407.1-201ENST00000404531 386 ntBASIC3.31□□□□□ -1.88
CHD1O14646 RPS7P5-201ENST00000441482 581 ntBASIC3.31□□□□□ -1.88
CHD1O14646 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.31□□□□□ -1.88
CHD1O14646 snoZ278.1-201ENST00000517059 112 ntBASIC3.31□□□□□ -1.88
CHD1O14646 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.31□□□□□ -1.88
CHD1O14646 ELOCP31-201ENST00000540463 467 ntBASIC3.31□□□□□ -1.88
CHD1O14646 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.31□□□□□ -1.88
CHD1O14646 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.31□□□□□ -1.88
CHD1O14646 PSMA6P4-201ENST00000603247 718 ntBASIC3.31□□□□□ -1.88
CHD1O14646 AL356280.1-201ENST00000603614 379 ntBASIC3.31□□□□□ -1.88
CHD1O14646 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHD1O14646 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC3.31□□□□□ -1.88
CHD1O14646 MTND5P12-201ENST00000502851 1449 ntBASIC3.31□□□□□ -1.88
CHD1O14646 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD1O14646 Z73417.1-201ENST00000447373 778 ntBASIC3.3□□□□□ -1.88
CHD1O14646 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.3□□□□□ -1.88
CHD1O14646 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD1O14646 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD1O14646 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.3□□□□□ -1.88
CHD1O14646 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD1O14646 HMGB1P1-201ENST00000522557 636 ntBASIC3.3□□□□□ -1.88
CHD1O14646 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD1O14646 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.3□□□□□ -1.88
CHD1O14646 RPL23AP61-201ENST00000623642 466 ntBASIC3.3□□□□□ -1.88
CHD1O14646 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHD1O14646 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CHD1O14646 RNU2-68P-201ENST00000410878 191 ntBASIC3.3□□□□□ -1.88
CHD1O14646 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD1O14646 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD1O14646 RPS29P11-201ENST00000496507 171 ntBASIC3.3□□□□□ -1.88
CHD1O14646 RNU6-964P-201ENST00000516524 69 ntBASIC3.3□□□□□ -1.88
CHD1O14646 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.3□□□□□ -1.88
CHD1O14646 AC120053.1-201ENST00000607706 736 ntBASIC3.3□□□□□ -1.88
CHD1O14646 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.3□□□□□ -1.88
CHD1O14646 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.3□□□□□ -1.88
CHD1O14646 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CHD1O14646 SNORD21-201ENST00000383953 95 ntBASIC3.29□□□□□ -1.88
CHD1O14646 USP9YP6-201ENST00000413550 854 ntBASIC3.29□□□□□ -1.88
CHD1O14646 AC104332.2-201ENST00000429959 156 ntBASIC3.29□□□□□ -1.88
CHD1O14646 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.29□□□□□ -1.88
CHD1O14646 USP9YP34-201ENST00000453983 808 ntBASIC3.29□□□□□ -1.88
CHD1O14646 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.29□□□□□ -1.88
CHD1O14646 RPS3AP4-201ENST00000555161 764 ntBASIC3.29□□□□□ -1.88
CHD1O14646 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.29□□□□□ -1.88
CHD1O14646 MIR4255-201ENST00000579351 72 ntBASIC3.29□□□□□ -1.88
CHD1O14646 AC099778.2-201ENST00000610904 211 ntBASIC3.29□□□□□ -1.88
CHD1O14646 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CHD1O14646 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHD1O14646 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CHD1O14646 AC092473.1-201ENST00000441098 221 ntBASIC3.28□□□□□ -1.88
CHD1O14646 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.28□□□□□ -1.88
CHD1O14646 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.28□□□□□ -1.88
CHD1O14646 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.28□□□□□ -1.88
CHD1O14646 OR5D17P-201ENST00000531492 978 ntBASIC3.28□□□□□ -1.88
CHD1O14646 RMST_2.1-201ENST00000617263 136 ntBASIC3.28□□□□□ -1.88
CHD1O14646 AC092650.2-201ENST00000619984 902 ntBASIC3.28□□□□□ -1.88
CHD1O14646 AC010872.1-201ENST00000624225 675 ntBASIC3.28□□□□□ -1.88
CHD1O14646 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CHD1O14646 RNU6-707P-201ENST00000364647 95 ntBASIC3.27□□□□□ -1.89
CHD1O14646 RPL21P18-201ENST00000469899 480 ntBASIC3.27□□□□□ -1.89
CHD1O14646 AC055855.1-201ENST00000489563 579 ntBASIC3.27□□□□□ -1.89
CHD1O14646 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.27□□□□□ -1.89
CHD1O14646 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.27□□□□□ -1.89
CHD1O14646 AC084768.2-201ENST00000622736 221 ntBASIC3.27□□□□□ -1.89
CHD1O14646 LRRC77P-213ENST00000637727 880 ntBASIC3.27□□□□□ -1.89
CHD1O14646 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CHD1O14646 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
CHD1O14646 AL358453.1-201ENST00000422522 250 ntBASIC3.27□□□□□ -1.89
CHD1O14646 AL591719.1-201ENST00000444669 744 ntBASIC3.27□□□□□ -1.89
CHD1O14646 RNU7-95P-201ENST00000459222 64 ntBASIC3.27□□□□□ -1.89
CHD1O14646 MLLT10P2-201ENST00000506434 249 ntBASIC3.27□□□□□ -1.89
CHD1O14646 RNA5SP76-201ENST00000516277 87 ntBASIC3.27□□□□□ -1.89
CHD1O14646 ARL2BPP2-201ENST00000550907 489 ntBASIC3.27□□□□□ -1.89
CHD1O14646 CD24P2-201ENST00000565486 219 ntBASIC3.27□□□□□ -1.89
CHD1O14646 SNORA4-201ENST00000584302 138 ntBASIC3.27□□□□□ -1.89
CHD1O14646 RPAP2P1-201ENST00000603626 1168 ntBASIC3.27□□□□□ -1.89
CHD1O14646 AC012531.5-201ENST00000611375 151 ntBASIC3.27□□□□□ -1.89
CHD1O14646 MIR6779-201ENST00000617283 64 ntBASIC3.27□□□□□ -1.89
CHD1O14646 XIST_intron.1-201ENST00000619444 68 ntBASIC3.27□□□□□ -1.89
CHD1O14646 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CHD1O14646 RNU1-51P-201ENST00000365345 176 ntBASIC3.26□□□□□ -1.89
CHD1O14646 MIR142-201ENST00000384835 87 ntBASIC3.26□□□□□ -1.89
CHD1O14646 AL590084.1-201ENST00000407885 387 ntBASIC3.26□□□□□ -1.89
CHD1O14646 AC009238.1-201ENST00000442165 424 ntBASIC3.26□□□□□ -1.89
CHD1O14646 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.26□□□□□ -1.89
CHD1O14646 AC009237.6-201ENST00000446969 424 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms