Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RN7SKP277-201ENST00000516895 283 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 RPL7P20-201ENST00000520308 745 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 OR11H5P-201ENST00000554039 926 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 MTND4LP24-201ENST00000572277 291 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AC115085.1-201ENST00000588924 229 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AC245036.5-201ENST00000596330 847 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AC009220.3-201ENST00000604318 586 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AL035413.2-201ENST00000604801 525 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AL137843.1-201ENST00000605078 385 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AL392112.1-201ENST00000605115 829 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 AC112503.2-201ENST00000609005 552 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TCRBV3S1A0A5B6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AC090740.1-201ENST00000623193 2262 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AC010680.1-201ENST00000590024 3590 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AC062016.1-201ENST00000355719 319 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 RNA5SP391-201ENST00000363456 119 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 MIR627-201ENST00000384979 97 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 MIR670-201ENST00000390142 98 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 SUMO2P12-201ENST00000405924 140 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 RPL17P12-201ENST00000413391 526 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 PTP4A1P7-201ENST00000423476 514 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 USP9YP8-201ENST00000441913 500 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 CBWD4P-201ENST00000445695 655 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 RPL7P49-201ENST00000471402 708 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 RN7SL636P-201ENST00000497504 294 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 HMGB1P22-201ENST00000505315 124 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AC008413.1-201ENST00000511864 177 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 RNA5SP364-201ENST00000516938 78 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AP004371.1-201ENST00000525240 214 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 RPS3AP23-202ENST00000574601 686 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AC022069.1-201ENST00000582910 658 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AL161756.2-201ENST00000604597 246 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 MIR6132-201ENST00000622083 109 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AC015726.3-201ENST00000624501 418 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 AC099654.7-201ENST00000635788 2127 ntBASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
TCRBV3S1A0A5B6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 TRGV7-201ENST00000427089 353 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 AL031663.1-201ENST00000437445 219 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 RABEPKP1-201ENST00000440529 1026 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 AP002345.1-201ENST00000456493 928 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 MTCYBP14-201ENST00000457471 715 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 MTND3P6-201ENST00000485242 339 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 AC008565.1-201ENST00000509046 885 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 SUB1P1-201ENST00000524415 382 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 AC027176.1-201ENST00000560204 514 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 MIR5195-201ENST00000583555 115 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 AL451007.1-201ENST00000595491 289 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 SNORA35B-201ENST00000607417 129 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 MIR6840-201ENST00000611937 71 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 CU459211.1-201ENST00000635667 749 ntBASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TCRBV3S1A0A5B6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AL596028.1-201ENST00000326971 197 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 RNU6-666P-201ENST00000363499 107 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AC007064.1-201ENST00000412238 351 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AC009963.1-201ENST00000417265 157 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 MYL8P-204ENST00000431574 518 ntBASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
TCRBV3S1A0A5B6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms