Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 NMD3P1-201ENST00000439704 1488 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 FRG1BP-201ENST00000278882 761 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 Y_RNA.46-201ENST00000362695 102 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-853P-201ENST00000364306 107 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 RPS20P2-201ENST00000402520 389 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 RPL7P25-201ENST00000404151 721 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 RPS3AP3-201ENST00000411933 242 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AL691449.1-201ENST00000426570 421 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC108734.1-201ENST00000439549 399 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 Z95327.1-201ENST00000446082 482 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AP1S2P1-201ENST00000457344 379 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-27P-201ENST00000516146 107 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 MRPL49P2-201ENST00000521066 465 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AP003385.6-201ENST00000531603 374 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 EEF1B2P4-201ENST00000551398 348 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC010546.1-201ENST00000569391 485 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC007448.1-201ENST00000582714 234 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC004853.1-201ENST00000604902 698 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 AC090578.1-201ENST00000604955 591 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 MLECP1-201ENST00000615893 709 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 MIR7641-1-201ENST00000627518 61 ntBASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
TCRBV7S3A2A0A539 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 Y_RNA.41-201ENST00000362646 102 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-989P-201ENST00000362756 107 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 SNORA56-201ENST00000383966 129 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 RNU6-1207P-201ENST00000384343 107 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 Y_RNA.582-201ENST00000391023 95 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 HLFP1-201ENST00000402375 499 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 RN7SKP247-201ENST00000411094 308 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 RPL21P109-201ENST00000422213 475 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 MTND6P13-201ENST00000443510 523 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 RPS4XP10-201ENST00000465034 731 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AC084198.1-201ENST00000477747 402 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AC138853.1-201ENST00000503549 823 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AC083829.1-201ENST00000503756 657 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 RAC1P2-201ENST00000511164 579 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 SNORA31.9-201ENST00000516429 84 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 RN7SKP116-201ENST00000516902 319 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 NARSP2-201ENST00000518524 679 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 RPL21P5-201ENST00000554662 472 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AL669831.4-202ENST00000590817 238 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AP003465.2-201ENST00000602571 373 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AC006329.2-201ENST00000611491 394 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 MIR6820-201ENST00000611508 62 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AP006248.2-201ENST00000623309 592 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AC095031.1-201ENST00000623685 672 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 AC091905.1-201ENST00000624400 311 ntBASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV7S3A2A0A539 MTND5P33-201ENST00000571250 1450 ntBASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV7S3A2A0A539 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms