Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 AC106785.1-201ENST00000565935 262 ntBASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 XIAPP1-201ENST00000603162 600 ntBASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 AL136363.1-201ENST00000605349 337 ntBASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 AC009090.3-201ENST00000616553 565 ntBASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 AL031601.2-202ENST00000622650 282 ntBASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 AC034229.5-201ENST00000624258 185 ntBASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 AC068880.5-201ENST00000624331 290 ntBASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.57□□□□□ -2.16
TRAV13-2A0A0B4J235 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 MIR422A-201ENST00000362286 90 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 RNU2-40P-201ENST00000410833 196 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 MTCO3P12-201ENST00000416718 547 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AL158156.1-201ENST00000422509 473 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 HSFY1P1-201ENST00000423928 1178 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AL445687.1-201ENST00000439946 251 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 SNRPGP6-201ENST00000451124 220 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC090515.1-201ENST00000465295 476 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC078857.1-201ENST00000469870 667 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 RPS27P21-201ENST00000486977 252 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC026427.2-201ENST00000506228 536 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC021146.7-201ENST00000509604 775 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 RNU1-40P-201ENST00000516816 164 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 RNU1-97P-201ENST00000516872 164 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC087272.1-201ENST00000523624 533 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC090666.1-201ENST00000578241 445 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AL356280.1-201ENST00000603614 379 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 BNIP3P7-201ENST00000605641 516 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 U6.48-201ENST00000618523 106 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 MIR7975-201ENST00000619350 68 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AL360181.4-201ENST00000621752 134 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC012640.5-201ENST00000623897 319 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC009902.3-201ENST00000606235 2172 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AL359851.1-201ENST00000569460 4997 ntBASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
TRAV13-2A0A0B4J235 AC244517.1-201ENST00000606030 2086 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 NSRP1P1-201ENST00000444067 1693 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 OR56A5-201ENST00000340110 738 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 RNU6-461P-201ENST00000364195 107 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 MIR183-201ENST00000384958 110 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 MIR449B-201ENST00000384995 97 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 EEF1A1P41-201ENST00000414667 207 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 SRIP2-201ENST00000428470 166 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 UBE2V1P1-201ENST00000430836 445 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AC233279.1-201ENST00000455300 423 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AC010099.1-201ENST00000455434 375 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 RN7SL542P-201ENST00000467147 294 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AL135752.1-201ENST00000479477 471 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AC022493.1-201ENST00000492984 337 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 RN7SL504P-201ENST00000494496 287 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 HMGB1P46-201ENST00000520062 610 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AC025755.1-201ENST00000521306 278 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AP003102.1-201ENST00000525638 661 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AP000867.2-201ENST00000532468 320 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AL121603.1-201ENST00000553815 142 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 TRAV28-201ENST00000557548 323 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AC010546.1-201ENST00000569391 485 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 AC061975.8-201ENST00000587058 721 ntBASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.55□□□□□ -2.16
TRAV13-2A0A0B4J235 NRBF2P5-201ENST00000603087 788 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms