Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 RPL23AP44-201ENST00000482216 473 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC107222.1-201ENST00000510899 637 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 OR4H12P-201ENST00000556269 907 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC005951.1-201ENST00000576706 485 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC090616.5-202ENST00000582111 297 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AL450489.1-201ENST00000612071 468 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC091046.2-201ENST00000620775 665 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC009501.3-201ENST00000605001 1352 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC004925.1-201ENST00000624256 2706 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC092326.2-201ENST00000624772 1561 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 SNORA51.4-201ENST00000364993 124 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 RNU6-253P-201ENST00000384730 105 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 MIR591-201ENST00000385290 95 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 RNU2-21P-201ENST00000410368 188 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AL513175.2-201ENST00000422071 443 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 NDUFA5P10-201ENST00000432147 357 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 PTGES3P5-201ENST00000455109 434 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC104472.2-201ENST00000469035 601 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC108860.1-201ENST00000484521 383 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 LINC00888-204ENST00000487386 421 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 RPL23AP49-201ENST00000492925 468 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC111193.1-201ENST00000504097 155 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 MTCO2P32-201ENST00000514865 403 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 RNA5SP76-201ENST00000516277 87 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 ZNF92P3-201ENST00000596594 954 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 MIR6873-201ENST00000622788 63 ntBASIC2.58□□□□□ -2
SCN10AQ9Y5Y9 PABPC1P7-201ENST00000413177 1513 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 API5P2-201ENST00000397055 1498 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 AL591416.1-201ENST00000404015 867 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 AC004022.2-201ENST00000413824 193 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 ATG3P1-201ENST00000419507 911 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 CKS1BP5-201ENST00000434172 273 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 HMGN1P8-201ENST00000463578 288 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 AC067904.2-201ENST00000517322 1283 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 AC109635.4-202ENST00000531666 412 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 AC067747.1-201ENST00000608026 250 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 MIR6766-201ENST00000622641 72 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 AC110994.2-201ENST00000635481 492 ntBASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.57□□□□□ -2
SCN10AQ9Y5Y9 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 TRIAP1P1-201ENST00000427062 225 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 MTCO1P43-201ENST00000431831 488 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC244505.4-201ENST00000434905 287 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AL603825.1-201ENST00000438481 80 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 SSXP5-201ENST00000443473 287 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AL024509.2-201ENST00000493462 493 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 RNU6-991P-201ENST00000516168 107 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 MIR4474-201ENST00000579189 78 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC135803.1-201ENST00000608748 565 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 U6.48-201ENST00000618523 106 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC026634.1-201ENST00000634369 198 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 MTND4P31-201ENST00000425607 1343 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AL049737.1-201ENST00000413920 1403 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 C1DP3-201ENST00000455013 423 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 FAM172BP-201ENST00000487497 1089 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC104090.1-201ENST00000506341 1171 ntBASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.56□□□□□ -2
SCN10AQ9Y5Y9 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms