Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AC104966.1-201ENST00000467010 1464 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 Y_RNA.106-201ENST00000363189 100 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU6-288P-201ENST00000363690 104 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 RPL11P3-201ENST00000395256 523 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 SYF2P2-201ENST00000417620 583 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 GNG5P5-201ENST00000420444 220 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 RPL7P2-201ENST00000427639 268 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 FTH1P25-201ENST00000447665 469 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 RPL21P41-201ENST00000459863 264 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 FTH1P2-201ENST00000466086 412 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AC108860.1-201ENST00000484521 383 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AC018437.1-201ENST00000492214 406 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AC092349.1-201ENST00000504903 310 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU6-1095P-201ENST00000516148 108 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 RN7SKP258-201ENST00000517151 304 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 RN7SKP35-201ENST00000517210 151 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AC026470.2-201ENST00000561492 181 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AC125232.2-201ENST00000592457 143 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AL365434.2-201ENST00000607979 234 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AL359091.2-201ENST00000609303 556 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AC244100.4-201ENST00000617747 388 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 AC114774.1-201ENST00000507410 1770 ntBASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PCDHGA11Q9Y5H2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 RN7SKP171-201ENST00000364417 303 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU6-596P-201ENST00000365395 98 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 Y_RNA.526-201ENST00000384572 110 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 MIR130B-202ENST00000385018 82 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 CRIP1P1-201ENST00000427567 185 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 PTMAP6-201ENST00000439110 327 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC023141.8-201ENST00000442554 208 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 OR1H1P-201ENST00000448731 937 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 IGHV5-78-201ENST00000450948 295 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 GEMIN2P1-201ENST00000454246 752 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 Z92846.1-201ENST00000456203 268 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU6-1132P-201ENST00000459214 107 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC069499.1-201ENST00000489433 509 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC093852.1-201ENST00000503587 266 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU6-840P-201ENST00000517275 65 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 FTH1P11-201ENST00000517577 551 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC084121.1-201ENST00000533882 835 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC078899.3-201ENST00000599065 212 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC006363.1-201ENST00000603806 463 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 ELOCP5-201ENST00000604924 333 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 MTND4LP5-201ENST00000605152 292 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 RNU6-85P-201ENST00000605989 107 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AL133481.2-203ENST00000607558 139 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 MIR6806-201ENST00000622141 64 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AL136228.1-201ENST00000622221 319 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 AC079776.5-201ENST00000641920 211 ntBASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PCDHGA11Q9Y5H2 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms