Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 SNORA31.3-201ENST00000516029 96 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 EDDM3DP-201ENST00000554692 434 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 RPL21P9-201ENST00000556149 474 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 MIR3154-201ENST00000577829 84 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 AL035410.2-201ENST00000604963 864 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 AC023043.4-201ENST00000612081 449 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 RMST_4.1-201ENST00000616886 107 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 AC000374.1-201ENST00000434698 1745 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 DLEU2L-201ENST00000371086 3555 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 AC008568.2-201ENST00000623862 2313 ntBASIC6.58□□□□□ -1.36
PCDHGA4Q9Y5G9 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 LCOR-201ENST00000286067 4542 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 RNY4P18-201ENST00000391107 89 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 MIR1275-201ENST00000408770 80 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AL133173.1-201ENST00000423458 397 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 RPL7L1P9-201ENST00000431298 745 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 SEPT7P4-201ENST00000437076 306 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 RANP8-201ENST00000444720 713 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC234771.2-201ENST00000445718 597 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 RPL7AP71-201ENST00000451120 739 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC144530.1-201ENST00000452862 555 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 RNU6-1211P-201ENST00000459179 105 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC006499.3-201ENST00000506077 748 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC095057.1-201ENST00000507583 168 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 RNU6-347P-201ENST00000516658 105 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 RN7SKP258-201ENST00000517151 304 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AL591767.3-201ENST00000554632 525 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 MIR3613-201ENST00000579844 87 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC067852.5-201ENST00000589299 310 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 MIR6861-201ENST00000618657 64 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC008873.1-201ENST00000625051 138 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC004158.1-201ENST00000564508 4319 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 MAPK10-338ENST00000641647 3362 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC027228.2-201ENST00000567141 2154 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 AC100778.3-201ENST00000580060 1750 ntBASIC6.57□□□□□ -1.36
PCDHGA4Q9Y5G9 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AP005435.3-201ENST00000531260 3198 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AC008758.3-201ENST00000507003 1829 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 U3.6-201ENST00000363622 211 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 RNU4-56P-201ENST00000364700 142 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 RNA5SP251-201ENST00000410614 137 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AF186996.5-201ENST00000418098 904 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AL121578.2-201ENST00000448797 447 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AL356981.1-201ENST00000454879 684 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 RN7SL552P-201ENST00000462094 276 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AC108043.1-201ENST00000512696 574 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 RNU6-612P-201ENST00000516909 102 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AC005363.1-201ENST00000530779 351 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 AC005828.6-201ENST00000606610 232 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 SNORD91B-202ENST00000608459 222 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 MIR6864-201ENST00000617935 70 ntBASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PCDHGA4Q9Y5G9 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms