Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.63□□□□□ -1.51
PCDHGC4Q9Y5F7 RAC1P9-201ENST00000604990 392 ntBASIC5.63□□□□□ -1.51
PCDHGC4Q9Y5F7 HMGN2P28-201ENST00000606102 262 ntBASIC5.63□□□□□ -1.51
PCDHGC4Q9Y5F7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PCDHGC4Q9Y5F7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PCDHGC4Q9Y5F7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGC4Q9Y5F7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDHGC4Q9Y5F7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDHGC4Q9Y5F7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PCDHGC4Q9Y5F7 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 OR4F13P-202ENST00000560066 2054 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 RNU6-1078P-201ENST00000364522 103 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 RNU6-214P-201ENST00000384130 107 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 Y_RNA.462-201ENST00000384268 102 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC110754.1-201ENST00000399740 601 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AP000580.1-201ENST00000404439 358 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 RN7SKP159-201ENST00000410657 292 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 RN7SKP293-201ENST00000411389 296 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 CHEK2P5-201ENST00000423877 246 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 PSMA2P3-201ENST00000429685 675 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AL158071.1-201ENST00000430315 461 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AL132765.1-201ENST00000434165 553 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AP000936.3-201ENST00000438127 255 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 MTCO3P8-201ENST00000453691 755 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC093852.1-201ENST00000503587 266 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 SNORA40.15-201ENST00000516884 107 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 RNU6-570P-201ENST00000517051 105 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC025423.5-201ENST00000550230 219 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 MIR4433B-201ENST00000581329 102 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 HMGB2P1-201ENST00000591146 634 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AL713866.2-201ENST00000603579 219 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC132068.1-201ENST00000623805 459 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AP000550.3-201ENST00000637734 379 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC232271.1-201ENST00000602455 2715 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 AC008669.1-201ENST00000565823 2178 ntBASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDHGC4Q9Y5F7 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 Y_RNA.270-201ENST00000364693 104 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 RNU6-715P-201ENST00000365204 103 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 RNU6-190P-201ENST00000384154 102 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 Y_RNA.551-201ENST00000384661 102 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 RN7SKP17-201ENST00000411242 351 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 RAC1P3-201ENST00000416129 580 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 AC007161.1-204ENST00000423039 460 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 AL360081.1-201ENST00000428299 555 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 OR6D1P-201ENST00000436165 939 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 CYCSP51-201ENST00000443545 318 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 AC243772.1-201ENST00000451620 410 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 RN7SL583P-201ENST00000475692 287 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 RN7SL466P-201ENST00000497546 295 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 AC135721.1-201ENST00000497954 479 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 RPS17P5-201ENST00000498293 408 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 AC122688.1-201ENST00000541494 223 ntBASIC5.61□□□□□ -1.51
PCDHGC4Q9Y5F7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms