Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 BTBD10P1-201ENST00000549824 1352 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 PABPC1P7-201ENST00000413177 1513 ntBASIC5.79□□□□□ -1.48
PCDHB11Q9Y5F2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC083843.2-201ENST00000568248 6253 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 Y_RNA.64-201ENST00000362845 102 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-770P-201ENST00000363929 105 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 MT-TC-201ENST00000387405 66 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC099677.1-201ENST00000420575 175 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 MTND5P15-201ENST00000434246 349 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 FCF1P4-201ENST00000448326 183 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 SDC4P-201ENST00000453285 601 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC006539.1-201ENST00000481419 501 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 ATP5LP3-201ENST00000514223 304 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 RN7SKP277-201ENST00000516895 283 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC012339.2-201ENST00000523996 453 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC104576.1-201ENST00000524225 88 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC084783.1-201ENST00000565846 910 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC006600.1-201ENST00000572529 153 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 FAM27E4-201ENST00000605259 342 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 uc_338.26-201ENST00000612659 160 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AL512624.1-201ENST00000613638 469 ntBASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PCDHB11Q9Y5F2 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.77□□□□□ -1.48
PCDHB11Q9Y5F2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC093775.1-201ENST00000624154 1868 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-806P-201ENST00000365147 105 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 RNU6-14P-201ENST00000384630 106 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 CYB5AP4-201ENST00000396692 399 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC013442.1-201ENST00000397347 228 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC092447.6-201ENST00000414578 210 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 RPL35AP3-201ENST00000414680 288 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AL590135.1-201ENST00000422215 156 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC099677.3-201ENST00000427081 395 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 DAP3P1-201ENST00000441522 278 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC105399.1-202ENST00000447303 205 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 snoU13.29-201ENST00000459370 104 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC010683.1-201ENST00000473673 378 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 Y_RNA.673-201ENST00000516306 88 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 SNORA40.15-201ENST00000516884 107 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AC015720.2-201ENST00000567709 334 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 MIR4420-201ENST00000583944 77 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 MIR6809-201ENST00000612189 116 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 SDR42E1P2-201ENST00000614861 481 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 SDR42E1P4-201ENST00000620894 481 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 AL691477.1-201ENST00000624398 162 ntBASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PCDHB11Q9Y5F2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms