Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AC006249.1-201ENST00000621223 471 ntBASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.47□□□□□ -2.01
HDGFL3Q9Y3E1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 ATP5F1P6-201ENST00000402768 767 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 RPL21P32-201ENST00000419877 477 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 COTL1P1-201ENST00000422309 375 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AC105272.1-201ENST00000438604 198 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 RPL23AP20-201ENST00000447965 421 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 OR6K1P-201ENST00000456766 971 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AC026412.2-201ENST00000512270 1075 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 SETP2-201ENST00000553886 926 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 COX6CP3-201ENST00000580869 223 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AL355812.1-201ENST00000603215 216 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AC128687.1-201ENST00000605304 619 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AL360181.4-201ENST00000621752 134 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AP003122.6-201ENST00000623831 495 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 SEC63P2-201ENST00000503863 1939 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 AP003122.5-201ENST00000527668 3766 ntBASIC2.46□□□□□ -2.02
HDGFL3Q9Y3E1 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 RNU6-1249P-201ENST00000363237 111 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 ATG3P1-201ENST00000419507 911 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AC109583.1-201ENST00000432156 268 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AL513321.1-201ENST00000441175 761 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AC008571.1-201ENST00000467232 300 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 RN7SL297P-201ENST00000483161 293 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 RNU6-551P-201ENST00000516661 103 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 ELOCP31-201ENST00000540463 467 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 CYCSP39-201ENST00000565821 309 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AC138761.3-201ENST00000579993 334 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AL513477.2-201ENST00000607858 568 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AC005046.1-201ENST00000608515 625 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AC021851.1-201ENST00000608537 1082 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 AL355810.1-201ENST00000614629 552 ntBASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HDGFL3Q9Y3E1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 TAB3P1-202ENST00000452645 1634 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 SNORD115-48-201ENST00000364764 76 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 RNU6-444P-201ENST00000383988 108 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 RNU6-441P-201ENST00000384545 106 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 FNDC3CP-201ENST00000420795 1155 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AC073310.1-201ENST00000423226 1033 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 RPL23AP58-201ENST00000440453 469 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 DNAJC19P8-201ENST00000452887 259 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AC096751.1-202ENST00000502691 1067 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 DYNLL1P6-201ENST00000503440 264 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AC004486.1-201ENST00000546846 233 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AC007954.1-201ENST00000554198 494 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AL355836.1-201ENST00000555951 870 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 LARP7P3-201ENST00000579888 337 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AC012254.4-201ENST00000588843 273 ntBASIC2.44□□□□□ -2.02
HDGFL3Q9Y3E1 AC009220.3-201ENST00000604318 586 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms