Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC063976.3-201ENST00000426849 329 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 CKS1BP5-201ENST00000434172 273 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AL121871.1-201ENST00000443413 436 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 ARL5AP2-201ENST00000444698 533 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC004263.1-201ENST00000479327 332 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC097462.2-201ENST00000504623 481 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC098799.1-201ENST00000504752 800 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 RNA5SP24-201ENST00000516478 95 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC021269.2-201ENST00000532318 330 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC106782.4-201ENST00000568264 210 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC103810.1-201ENST00000579873 453 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 SNORD53-201ENST00000579969 78 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 VN1R92P-201ENST00000598511 928 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AL137843.1-201ENST00000605078 385 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC008962.1-201ENST00000605729 304 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC013562.2-201ENST00000611632 603 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AL359535.1-201ENST00000612100 1087 ntBASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.59□□□□□ -2.15
UBE2D4Q9Y2X8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
UBE2D4Q9Y2X8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
UBE2D4Q9Y2X8 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
UBE2D4Q9Y2X8 AP001350.1-201ENST00000601906 1524 ntBASIC1.59□□□□□ -2.16
UBE2D4Q9Y2X8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
UBE2D4Q9Y2X8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
UBE2D4Q9Y2X8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
UBE2D4Q9Y2X8 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AL596028.1-201ENST00000326971 197 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 RNU6-50P-201ENST00000362356 103 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 RNU6-1331P-201ENST00000363658 106 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 RNU4-52P-201ENST00000384209 138 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 SNRPEP4-201ENST00000435815 279 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 GZMAP1-201ENST00000503054 631 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 MTCO1P47-201ENST00000523889 1271 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 GTF3AP2-201ENST00000557014 266 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 MIR5007-201ENST00000583098 95 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 MIMT1-201ENST00000597105 1050 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AC006023.1-201ENST00000603944 259 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AC007621.1-201ENST00000604544 437 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AL121917.1-203ENST00000605534 577 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AC113194.1-201ENST00000606037 500 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 OR2AS2P-201ENST00000606902 342 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 MIR203B-201ENST00000636080 86 ntBASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
UBE2D4Q9Y2X8 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 OR5J1P-201ENST00000313544 939 ntBASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 RNU6-335P-201ENST00000364563 113 ntBASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 SNORA6-201ENST00000384033 151 ntBASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 MIR524-201ENST00000385242 87 ntBASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 TAS2R15P-201ENST00000390674 928 ntBASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 AC092427.1-202ENST00000430569 476 ntBASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 AC108734.3-201ENST00000481241 1165 ntBASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 AL024509.2-201ENST00000493462 493 ntBASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 GTF2IP9-201ENST00000502460 301 ntBASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 AC008565.1-201ENST00000509046 885 ntBASIC1.57□□□□□ -2.16
UBE2D4Q9Y2X8 AC025755.1-201ENST00000521306 278 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms