Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 RNU6-1251P-201ENST00000364502 107 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 MIR142-201ENST00000384835 87 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 RPL26P37-201ENST00000411983 438 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 RPS3AP9-201ENST00000417027 792 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AL356583.2-201ENST00000426536 280 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AL591212.2-201ENST00000433923 257 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 UBE2FP3-201ENST00000436366 524 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 RPS27AP15-201ENST00000447672 466 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 RPL36AP13-201ENST00000457490 317 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 RNU7-140P-201ENST00000459546 60 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 Y_RNA.631-201ENST00000459607 101 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 RPL35AP15-201ENST00000468042 339 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC006517.1-201ENST00000480485 328 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 NPM1P21-201ENST00000513394 762 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 RNU6-352P-201ENST00000516908 107 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AP003122.4-201ENST00000530980 758 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC006064.5-201ENST00000541782 248 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AP001004.1-201ENST00000582468 324 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC010200.2-201ENST00000605098 235 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AL136363.1-201ENST00000605349 337 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AL133255.1-201ENST00000606374 441 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC005021.1-201ENST00000608730 355 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC069209.1-201ENST00000619282 651 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 CR392039.5-201ENST00000623201 510 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 RPL23AP61-201ENST00000623642 466 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 MTND4P14-201ENST00000435799 1354 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 AC073346.2-201ENST00000624724 2058 ntBASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
NOTCH3Q9UM47 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC024560.2-201ENST00000507981 1497 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 Y_RNA.67-201ENST00000362870 100 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 RNU5F-6P-201ENST00000362979 116 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 U8.11-201ENST00000384699 133 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 U8.12-201ENST00000384701 133 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 RNU11-4P-201ENST00000391149 133 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC098592.2-201ENST00000413158 265 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 ZNF90P2-204ENST00000419323 1075 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 CALM1P1-201ENST00000442082 433 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 RANP8-201ENST00000444720 713 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 U8.18-201ENST00000459285 133 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC110792.2-201ENST00000510278 224 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 OR5AP1P-201ENST00000529730 940 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 OR6C73P-201ENST00000546432 358 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC044913.1-201ENST00000557200 430 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC120057.2-201ENST00000571520 271 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 MIR5697-201ENST00000578045 78 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 MIR5195-201ENST00000583555 115 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC010680.4-201ENST00000605334 543 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AL355472.4-201ENST00000610233 626 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AP001350.1-201ENST00000601906 1524 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 LINC02471-203ENST00000641941 4752 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 RNA5SP22-201ENST00000365393 109 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 MTCYBP36-201ENST00000404146 440 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 RNU6ATAC-201ENST00000408749 126 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 RNU2-39P-201ENST00000410604 198 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 EIF1P3-201ENST00000423841 334 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 MTCO3P46-201ENST00000425787 232 ntBASIC3.14□□□□□ -1.91
NOTCH3Q9UM47 AC073335.1-201ENST00000427776 363 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms