Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AC092427.1-201ENST00000439177 601 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 RPS20P24-201ENST00000457473 361 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AP000873.1-201ENST00000463987 400 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC078817.1-201ENST00000492623 435 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC022080.3-201ENST00000544433 482 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC023813.2-201ENST00000564321 469 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 BNIP3P38-201ENST00000601117 544 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 DUXAP3-201ENST00000603616 594 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC078899.5-201ENST00000612475 178 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC009237.17-201ENST00000618111 748 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC009318.4-201ENST00000620496 486 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 AC120349.2-201ENST00000625002 298 ntBASIC6.22□□□□□ -1.41
SHROOM4Q9ULL8 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
SHROOM4Q9ULL8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 RNU6-657P-201ENST00000383904 107 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 RPL31P1-201ENST00000398116 372 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 AL136116.1-201ENST00000403591 381 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 RNA5SP56-201ENST00000410277 118 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 HMGN2P21-201ENST00000447764 270 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 OR5H5P-201ENST00000503164 928 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 AC008885.1-201ENST00000514930 301 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 HIGD1AP1-201ENST00000550979 275 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 AC022662.1-201ENST00000580252 331 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 AC010928.3-201ENST00000587712 541 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 BDH2P1-201ENST00000602288 736 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 AC109315.1-201ENST00000584143 1347 ntBASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SHROOM4Q9ULL8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 XIAPP3-201ENST00000312918 795 ntBASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 SNORD82-201ENST00000365530 70 ntBASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 AC016769.3-201ENST00000396562 315 ntBASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 RNU6-311P-201ENST00000516224 102 ntBASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 AL139174.1-201ENST00000531489 886 ntBASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 BNIP3P24-201ENST00000593398 557 ntBASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 AC023510.2-201ENST00000622162 746 ntBASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SHROOM4Q9ULL8 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 SNRPEP3-201ENST00000338402 276 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 SNORD116.1-201ENST00000365628 92 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 Y_RNA.493-201ENST00000384422 102 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 RNU6-1122P-201ENST00000384449 107 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 SNRPEP2-201ENST00000397592 279 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 RNU4-78P-201ENST00000410940 126 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 NUP35P1-201ENST00000422734 947 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 LAMTOR3P1-201ENST00000428620 370 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 OFD1P13Y-201ENST00000431179 1232 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 ATP5F1P1-201ENST00000433775 569 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 AL357552.1-201ENST00000445254 415 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 AL512310.1-201ENST00000548639 172 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 AC125611.1-201ENST00000549563 229 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 HIGD1AP17-201ENST00000554576 276 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 AL451074.6-201ENST00000608512 729 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 CR383658.2-201ENST00000547576 1525 ntBASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SHROOM4Q9ULL8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 RNU6-339P-201ENST00000384310 107 ntBASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 SSR1P2-201ENST00000415208 787 ntBASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 RPL35AP12-201ENST00000425362 338 ntBASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 RPL23AP74-201ENST00000437246 471 ntBASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 PTENP1-201ENST00000447117 1215 ntBASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 SNRPGP5-201ENST00000456003 220 ntBASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 AC026412.2-201ENST00000512270 1075 ntBASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.18□□□□□ -1.42
SHROOM4Q9ULL8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms