Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNU7-125P-201ENST00000458760 62 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AC104563.1-201ENST00000476147 376 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 HMGB1P36-201ENST00000487709 576 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 CEACAMP10-202ENST00000495431 496 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AC010486.2-201ENST00000505572 483 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 TXNP6-201ENST00000510190 310 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 NDUFB9P3-201ENST00000521269 501 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 HIGD1AP5-201ENST00000529959 259 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AC090616.2-202ENST00000584248 222 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AC025811.1-201ENST00000604312 472 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AC004223.4-201ENST00000612426 332 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 AL356585.4-201ENST00000623078 1229 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 CRYM-AS1-204ENST00000637983 556 ntBASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.94□□□□□ -1.78
LIMA1Q9UHB6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AL365440.1-201ENST00000436135 2167 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 MIR30E-201ENST00000362104 92 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 Y_RNA.234-201ENST00000364409 97 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 RNA5SP189-201ENST00000364920 115 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 MIR320C1-201ENST00000408566 88 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 RNU4-72P-201ENST00000410754 173 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC068533.1-201ENST00000418542 415 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 TPT1P12-201ENST00000448968 492 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC010285.1-201ENST00000470580 392 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC017015.1-201ENST00000477387 286 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC072039.1-201ENST00000477611 581 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC093267.1-201ENST00000489176 961 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 RNU2-27P-201ENST00000516185 142 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC087276.1-201ENST00000529659 480 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC009101.1-201ENST00000568135 242 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AL353997.4-201ENST00000586196 166 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC072039.2-201ENST00000608883 439 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 VIS1.1-201ENST00000610517 203 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC079248.2-201ENST00000623779 326 ntBASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.93□□□□□ -1.78
LIMA1Q9UHB6 AP004289.2-201ENST00000444413 1457 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC010733.2-201ENST00000589496 5702 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AL161781.1-201ENST00000354277 403 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 SNORA31-201ENST00000362607 130 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AP002088.1-201ENST00000382740 395 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 MIR607-201ENST00000385241 96 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 RNU2-47P-201ENST00000410649 186 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 Y_RNA.625-201ENST00000411256 107 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 RPS15AP38-201ENST00000413110 372 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC099677.1-201ENST00000420575 175 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AL138799.3-201ENST00000438968 350 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 RPS24P6-201ENST00000452670 400 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 snoU13.8-201ENST00000458890 104 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AL139099.1-201ENST00000497398 403 ntBASIC3.92□□□□□ -1.78
LIMA1Q9UHB6 AC020893.1-201ENST00000502452 580 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms