Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC234781.2-201ENST00000426370 994 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC011242.1-201ENST00000433596 1158 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 HMGB3P6-201ENST00000444896 598 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 HMGN1P5-201ENST00000448591 263 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC112492.1-201ENST00000449607 712 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 BTF3P5-201ENST00000457252 467 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 FTH1P2-201ENST00000466086 412 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AP002884.2-201ENST00000471647 395 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC006483.1-201ENST00000487308 313 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 VN1R104P-201ENST00000505115 1009 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC111000.2-201ENST00000507775 550 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC107934.2-201ENST00000518653 310 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC055876.1-202ENST00000567053 138 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 MTCO3P24-201ENST00000572729 782 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC067852.3-201ENST00000589177 561 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AL022099.1-201ENST00000604551 712 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC022509.4-201ENST00000621404 572 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC073348.1-201ENST00000623002 331 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 AP002371.2-201ENST00000624450 503 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 CRYM-AS1-204ENST00000637983 556 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 MIR1322-201ENST00000638013 71 ntBASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CHRNA9Q9UGM1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC005539.1-201ENST00000443768 1479 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 RNU4-35P-201ENST00000362588 141 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 SNORA14A-201ENST00000364773 135 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 RNU6-224P-201ENST00000384055 107 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 SAR1AP2-201ENST00000392696 594 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 MTATP6P27-201ENST00000416987 621 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 BX842559.1-201ENST00000419615 532 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 RPS15AP6-201ENST00000420703 385 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 RPL31P12-201ENST00000422587 358 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 MTCO2P5-201ENST00000422621 426 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 DPPA2P1-201ENST00000428060 556 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 HMGN2P31-201ENST00000432430 273 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC097262.1-201ENST00000452559 548 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 RNA5SP310-201ENST00000459084 116 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC010468.1-201ENST00000461022 817 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC025518.1-201ENST00000479856 347 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC006499.5-201ENST00000505037 514 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC022483.1-201ENST00000514020 567 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 RNU6-1225P-201ENST00000516336 65 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 FAM60DP-201ENST00000524174 632 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 OR5AK1P-201ENST00000524837 922 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 LARP7P2-201ENST00000575306 125 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 MIR3158-1-201ENST00000583596 81 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC013444.2-201ENST00000603317 787 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC245389.1-201ENST00000605141 529 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC112220.2-201ENST00000605513 533 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC006133.1-201ENST00000617106 264 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AL596245.1-201ENST00000618994 362 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AL392088.2-201ENST00000637607 285 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC233263.6-201ENST00000631132 1963 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 AC087359.1-201ENST00000508335 1740 ntBASIC3.1□□□□□ -1.91
CHRNA9Q9UGM1 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 SNORD17-201ENST00000390930 237 ntBASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 SKINT1L-201ENST00000401057 817 ntBASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 Z99755.1-201ENST00000414048 380 ntBASIC3.09□□□□□ -1.91
CHRNA9Q9UGM1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms