Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AL031183.1-201ENST00000457667 207 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC008571.1-201ENST00000467232 300 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC090543.1-201ENST00000492168 485 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 DSTNP2-201ENST00000504533 515 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC108157.1-201ENST00000510511 539 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC096725.1-201ENST00000514266 313 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 RNA5SP282-201ENST00000516355 108 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 HMGB1P46-201ENST00000520062 610 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 NUTF2P8-201ENST00000604593 363 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AL133507.1-201ENST00000605269 557 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC013468.1-201ENST00000608680 598 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC018926.3-201ENST00000618841 406 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC007275.1-201ENST00000621243 671 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AP001002.2-201ENST00000625137 386 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 Z82195.2-201ENST00000612348 18351 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC104446.1-201ENST00000613728 1321 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 RNU6-1249P-201ENST00000363237 111 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 RNU6-1226P-201ENST00000384317 107 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 RPS3AP9-201ENST00000417027 792 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 RPS6P14-201ENST00000425165 719 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC006548.1-201ENST00000427470 102 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC114973.1-201ENST00000429057 632 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 MTCYBP34-201ENST00000439552 670 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC092685.1-201ENST00000447960 1243 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC008280.2-201ENST00000455473 307 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC009901.1-201ENST00000506703 541 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 TBCAP3-201ENST00000512475 312 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC090695.1-201ENST00000561269 1222 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 DPRXP5-201ENST00000604662 539 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC018618.2-201ENST00000604770 446 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC135507.2-201ENST00000612443 309 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AL355810.1-201ENST00000614629 552 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AC008083.4-201ENST00000615076 444 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 CR381572.1-201ENST00000625098 102 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 AP000526.1-201ENST00000603308 1388 ntBASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.47□□□□□ -2.01
VPS29Q9UBQ0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.01
VPS29Q9UBQ0 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 RNU6-989P-201ENST00000362756 107 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 RNU6-761P-201ENST00000384148 107 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 SNORA9-201ENST00000384215 133 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 RNA5SP252-201ENST00000391131 119 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 RPS4XP3-201ENST00000398541 413 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 FAT1P1-201ENST00000406588 507 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 HMGN2P30-201ENST00000423237 256 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 RPL7P44-201ENST00000424827 742 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC005189.1-201ENST00000431286 310 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 snoU13.22-201ENST00000459428 104 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AIG1P1-201ENST00000503376 148 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 MTCO3P42-201ENST00000509488 518 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 MTCO3P39-201ENST00000514812 518 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC104057.1-201ENST00000515547 497 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 RN7SKP132-201ENST00000516001 208 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 COX6CP8-201ENST00000522620 226 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC093014.1-201ENST00000548926 724 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 NBEAP1-201ENST00000554452 979 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 CBX3P2-202ENST00000583365 535 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC017100.2-201ENST00000584628 355 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC060766.3-201ENST00000591442 263 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AP001330.4-201ENST00000604350 154 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC242628.1-201ENST00000606810 391 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC245100.7-201ENST00000609678 442 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 AC002064.3-201ENST00000623448 346 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 CUL1P1-201ENST00000509510 2425 ntBASIC2.46□□□□□ -2.02
VPS29Q9UBQ0 FAM35BP-202ENST00000497389 3337 ntBASIC2.45□□□□□ -2.02
VPS29Q9UBQ0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms