Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC010620.2-201ENST00000600135 313 ntBASIC2.03□□□□□ -2.08
COMMD3Q9UBI1 AC125494.3-201ENST00000602759 455 ntBASIC2.03□□□□□ -2.08
COMMD3Q9UBI1 U6.48-201ENST00000618523 106 ntBASIC2.03□□□□□ -2.08
COMMD3Q9UBI1 AC018755.4-201ENST00000619715 454 ntBASIC2.03□□□□□ -2.08
COMMD3Q9UBI1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
COMMD3Q9UBI1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
COMMD3Q9UBI1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.09
COMMD3Q9UBI1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 RNU6-301P-201ENST00000384277 107 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 YME1L1P1-201ENST00000429435 297 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 RPL21P133-201ENST00000443666 476 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 HMGB1P48-201ENST00000446155 598 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 MTND3P24-201ENST00000506306 329 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AC074250.1-201ENST00000511117 192 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 HMGB1P23-201ENST00000518743 568 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AL049874.4-201ENST00000557593 255 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AC107954.1-201ENST00000565906 727 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AC105137.2-201ENST00000569073 466 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 ISCA1P3-201ENST00000577104 373 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 MIR5694-201ENST00000581190 76 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AC103881.1-201ENST00000603476 538 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 MIR6840-201ENST00000611937 71 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 AC097714.1-201ENST00000511272 1647 ntBASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
COMMD3Q9UBI1 MTCO1P6-201ENST00000481192 1384 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AL122126.1-201ENST00000546905 1318 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 RNA5SP139-201ENST00000364340 117 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 RNU1-140P-201ENST00000365040 165 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 RNA5SP37-201ENST00000365420 130 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 MIR627-201ENST00000384979 97 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 RNU6-837P-201ENST00000391056 108 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AL360182.1-201ENST00000397433 468 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 FABP12P1-201ENST00000401911 322 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 MTND1P23-201ENST00000416931 372 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC091390.3-201ENST00000426478 338 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 FCF1P1-201ENST00000432690 571 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 RPS15AP28-201ENST00000435088 386 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 TPTE2P6-202ENST00000445572 1007 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 RPL23AP15-201ENST00000450202 459 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 FTH1P2-201ENST00000466086 412 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC104629.2-201ENST00000468627 598 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC104689.1-201ENST00000473356 768 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 RPL36AP51-201ENST00000487216 318 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AL358832.1-201ENST00000497800 389 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC026436.1-201ENST00000510537 270 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 CCNG2P1-201ENST00000549521 1000 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC025281.1-201ENST00000567026 265 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC092474.3-201ENST00000603022 568 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC106791.2-201ENST00000604680 391 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AC079597.1-201ENST00000624306 508 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 AP000553.5-201ENST00000641933 54 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 NSRP1P1-201ENST00000444067 1693 ntBASIC2.01□□□□□ -2.09
COMMD3Q9UBI1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 MTND5P1-201ENST00000445440 1375 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
COMMD3Q9UBI1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
COMMD3Q9UBI1 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2□□□□□ -2.09
COMMD3Q9UBI1 MIR34B-201ENST00000385076 84 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 TAS2R15P-201ENST00000390674 928 ntBASIC2□□□□□ -2.09
COMMD3Q9UBI1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms