Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RPL23AP2-201ENST00000471227 466 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 RPL35P6-201ENST00000490024 372 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 OR51K1P-201ENST00000510214 950 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 RNU6-1220P-201ENST00000517126 108 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AP003072.2-201ENST00000527756 676 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 SUB1P2-201ENST00000556401 297 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AL138721.1-201ENST00000616756 179 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AC019226.1-201ENST00000625666 515 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC067945.1-201ENST00000342609 618 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 RNA5SP307-201ENST00000362863 116 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 RNU4-12P-201ENST00000365233 139 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 Y_RNA.372-201ENST00000365599 102 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 SNORD3H-201ENST00000384486 214 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 MIR323B-201ENST00000385269 82 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 CIR1P3-201ENST00000405137 479 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AL590002.1-201ENST00000406554 418 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 RNU4-65P-201ENST00000410473 140 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 CHEK2P3-201ENST00000416118 248 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 SSXP9-201ENST00000417503 292 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AL672167.3-201ENST00000465951 960 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AL049714.1-201ENST00000466686 347 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AL121769.1-201ENST00000469473 401 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 RPS18P6-201ENST00000476880 458 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 ARL4AP2-201ENST00000507378 601 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 HIGD1AP14-201ENST00000507617 282 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 NDUFB5P1-201ENST00000508134 564 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 ARL2BPP6-201ENST00000512757 439 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC114797.1-201ENST00000514003 728 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC026801.2-201ENST00000515352 425 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 RNA5SP154-201ENST00000516193 111 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AP004371.1-201ENST00000525240 214 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 RN7SL753P-201ENST00000581238 290 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC011487.3-201ENST00000593607 453 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AL606834.2-201ENST00000602954 668 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 BPIFA4P-203ENST00000603168 689 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC087763.1-201ENST00000603391 286 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC103710.2-201ENST00000609912 942 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC017083.3-201ENST00000609955 700 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC015813.4-201ENST00000610469 179 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 MIR6826-201ENST00000617808 98 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AL603758.1-201ENST00000618654 241 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 MIR6886-201ENST00000619864 61 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AL353748.2-201ENST00000622148 471 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC243312.2-201ENST00000623340 601 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 OTUD4P1-201ENST00000237841 3067 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
MKS1Q9NXB0 AL365440.1-201ENST00000436135 2167 ntBASIC4.53□□□□□ -1.68
MKS1Q9NXB0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.52□□□□□ -1.69
MKS1Q9NXB0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms