Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL590099.1-201ENST00000615276 138 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 AC011330.2-201ENST00000621680 635 ntBASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
BLOC1S4Q9NUP1 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 RNU6-931P-201ENST00000363850 107 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 RPL21P17-201ENST00000397467 475 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 RAB9AP3-201ENST00000412737 573 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AL008987.1-201ENST00000415528 237 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 HIGD1AP15-201ENST00000416198 280 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AL590103.1-201ENST00000434488 307 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 OR6K5P-201ENST00000447050 945 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 RAB9AP1-201ENST00000449393 573 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 RPL23AP35-201ENST00000451906 501 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 MTND2P14-201ENST00000482139 351 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 MTND4LP31-201ENST00000514859 294 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 MIR2114-201ENST00000516645 80 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AP001804.3-201ENST00000525146 880 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 PDCL2P2-201ENST00000533651 189 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AP005205.1-201ENST00000563503 508 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 MIR4738-201ENST00000579134 87 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC093227.2-201ENST00000589357 285 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 VN1R92P-201ENST00000598511 928 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC013444.2-201ENST00000603317 787 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AP002826.1-201ENST00000608835 315 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC092106.3-201ENST00000611308 722 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AL390240.1-201ENST00000612950 384 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AL110115.1-201ENST00000614396 364 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AL136981.2-201ENST00000617319 734 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 MIR6130-201ENST00000619419 109 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC002550.2-201ENST00000621246 394 ntBASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BLOC1S4Q9NUP1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 ZNF285B-201ENST00000561698 1767 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AL353746.1-201ENST00000566293 6881 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 RNU6-97P-201ENST00000363387 104 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 MIR135A2-201ENST00000384854 100 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AL445189.1-201ENST00000405722 338 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AL356967.1-201ENST00000406305 431 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 U3.39-201ENST00000408569 239 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 RPS3AP25-201ENST00000411660 793 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC017083.1-201ENST00000428093 483 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 RAC1P7-201ENST00000445367 377 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 EXTL2P1-201ENST00000446218 416 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 RN7SL542P-201ENST00000467147 294 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 ARL2BPP6-201ENST00000512757 439 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 RNU1-95P-201ENST00000516357 160 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 RNU1-128P-201ENST00000516704 160 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 RNU6-714P-201ENST00000516963 103 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 MED28P6-201ENST00000558776 231 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AL354943.1-201ENST00000572103 781 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 MIR4644-201ENST00000579929 84 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AL109618.2-201ENST00000605527 211 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AC107952.2-201ENST00000606048 486 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 DLEU1_2.1-201ENST00000617920 342 ntBASIC4□□□□□ -1.77
BLOC1S4Q9NUP1 AL161637.1-201ENST00000622380 412 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms