Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 AL356274.2-201ENST00000624379 3752 ntBASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SMC4Q9NTJ3 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC004925.1-201ENST00000624256 2706 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AP002088.1-201ENST00000382740 395 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 RNU6-1181P-201ENST00000384191 106 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 MIR513B-201ENST00000385136 84 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 RN7SKP111-201ENST00000410349 271 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 RNU2-15P-201ENST00000410692 191 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 RNU2-37P-201ENST00000410695 177 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 RPS3AP25-201ENST00000411660 793 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 BX323014.1-201ENST00000412876 237 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC099677.1-201ENST00000420575 175 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 ATP5F1P1-201ENST00000433775 569 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 MTND2P19-201ENST00000449129 1012 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 RPL12P26-201ENST00000452430 487 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 USP9YP25-201ENST00000457708 443 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 RPL23AP67-201ENST00000465341 474 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 FCF1P8-201ENST00000510322 597 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC116353.3-201ENST00000511215 249 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC109635.4-202ENST00000531666 412 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 MTATP6P24-201ENST00000576835 677 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC004987.4-201ENST00000603383 338 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC097478.2-201ENST00000610572 514 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC091925.2-201ENST00000625059 256 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC006927.4-201ENST00000639187 543 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC097714.1-201ENST00000511272 1647 ntBASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SMC4Q9NTJ3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
SMC4Q9NTJ3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.34□□□□□ -1.72
SMC4Q9NTJ3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AP002907.1-201ENST00000606361 1430 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 MIR184-201ENST00000384962 84 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 HSPE1P26-201ENST00000405341 275 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 RAD23BP2-201ENST00000416003 1207 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AL356968.1-201ENST00000416622 474 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 MTCO3P12-201ENST00000416718 547 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 CFTRP1-201ENST00000456646 183 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 snoU13.24-201ENST00000458998 104 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 SNORA31.20-201ENST00000517111 133 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 MTCO2P15-201ENST00000532655 656 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC018630.1-201ENST00000541376 925 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 MIR5186-201ENST00000577504 120 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC007349.4-201ENST00000608114 532 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC063944.3-201ENST00000609969 533 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AL590282.1-201ENST00000610379 1136 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC092106.3-201ENST00000611308 722 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC019176.2-201ENST00000611579 315 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 AC110801.1-201ENST00000623590 212 ntBASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SMC4Q9NTJ3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SMC4Q9NTJ3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms