Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC127502.3-201ENST00000636170 1206 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 ELL2P4-201ENST00000446870 1376 ntBASIC4.12□□□□□ -1.75
DDX4Q9NQI0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.12□□□□□ -1.75
DDX4Q9NQI0 ZNF833P-201ENST00000424938 1494 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 RNU6-1243P-201ENST00000364028 107 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 RNU6-553P-201ENST00000364047 96 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 RNU6-657P-201ENST00000383904 107 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 SSXP10-201ENST00000402595 565 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 RNA5SP104-201ENST00000410989 118 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC069218.2-201ENST00000411665 344 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 Z92545.1-201ENST00000411782 234 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 MTCYBP38-201ENST00000417160 1123 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 PSMA2P3-201ENST00000429685 675 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AL590103.1-201ENST00000434488 307 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 Z75741.1-201ENST00000446793 314 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC097262.1-201ENST00000452559 548 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AP000873.1-201ENST00000463987 400 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 RN7SL594P-201ENST00000470590 287 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 SYPL1P1-201ENST00000473622 768 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 RNF138P1-201ENST00000502765 546 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC117522.2-201ENST00000510049 657 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 RNY4P37-201ENST00000516225 96 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AP006245.1-201ENST00000522549 120 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC008127.2-201ENST00000549925 1075 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC007954.1-201ENST00000554198 494 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC135628.1-201ENST00000568867 534 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC018714.1-201ENST00000605028 208 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC113194.1-201ENST00000606037 500 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 RMST_9.1-201ENST00000619945 193 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 FAM157B-203ENST00000639350 358 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC011477.1-204ENST00000623416 1325 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 AC027290.2-201ENST00000623210 18662 ntBASIC4.11□□□□□ -1.75
DDX4Q9NQI0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 HMGN2P8-201ENST00000391458 268 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 RPL23AP29-201ENST00000397284 453 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 RNA5SP39-201ENST00000411245 120 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 NANOGP6-201ENST00000429190 847 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 AC091862.1-201ENST00000438016 1100 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 AC092757.1-201ENST00000467293 467 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 OR4G11P-201ENST00000492842 939 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 AC114981.1-201ENST00000503897 678 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 PHBP14-201ENST00000512887 367 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 OR6C73P-201ENST00000546432 358 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 AC012493.2-201ENST00000595083 291 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 AC124312.4-201ENST00000605533 310 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 MIR4496-201ENST00000635896 61 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
DDX4Q9NQI0 USP8P1-201ENST00000494673 3183 ntBASIC4.1□□□□□ -1.75
DDX4Q9NQI0 AC018555.1-201ENST00000567548 1980 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 RNA5SP197-201ENST00000363357 119 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 MIR128-1-201ENST00000384921 82 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
DDX4Q9NQI0 RN7SKP111-201ENST00000410349 271 ntBASIC4.09□□□□□ -1.75
DDX4Q9NQI0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms