Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC005962.2-201ENST00000611427 652 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AC009464.1-201ENST00000615731 469 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 AL355493.4-201ENST00000618530 292 ntBASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCX3AQ9NNX9 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 RNU6-251P-201ENST00000363235 104 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 SNORA9.2-201ENST00000365361 133 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 RPL21P17-201ENST00000397467 475 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC025750.1-201ENST00000399891 379 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AL356057.2-201ENST00000403318 432 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 RPS20P25-201ENST00000412447 352 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 RPL7P37-201ENST00000425095 738 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AL512661.1-201ENST00000434586 1253 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 RPS15AP7-201ENST00000439294 405 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 MTCO3P43-201ENST00000440974 771 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AL096803.2-201ENST00000450032 677 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 CYCSP35-201ENST00000451978 304 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC016724.1-201ENST00000453215 421 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC234775.1-201ENST00000454247 670 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC006445.2-201ENST00000510061 472 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 OR4R1P-201ENST00000529879 463 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 MYL12BP1-201ENST00000569826 507 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC012493.2-201ENST00000595083 291 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC020895.1-201ENST00000595362 272 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AC012443.1-201ENST00000605605 231 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AL137847.3-201ENST00000611521 109 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 AL161637.1-201ENST00000622380 412 ntBASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
VCX3AQ9NNX9 MTND4P21-201ENST00000453886 1357 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 RNU6-582P-201ENST00000362989 107 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 RNU6-173P-201ENST00000364215 104 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC016769.3-201ENST00000396562 315 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 PPIAP31-201ENST00000405422 495 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 RPL7P30-201ENST00000420888 709 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 NDUFB4P6-201ENST00000436819 366 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 LSM1P1-201ENST00000438629 273 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC002542.1-201ENST00000440683 193 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 VN1R34P-201ENST00000447387 883 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AL050341.1-201ENST00000447743 313 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 RNU7-140P-201ENST00000459546 60 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC091959.2-201ENST00000477363 321 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC010625.1-201ENST00000511296 403 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 RNU6-885P-201ENST00000516607 104 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC009163.5-201ENST00000575421 637 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 U73023.1-201ENST00000603134 700 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AC138932.5-201ENST00000617759 563 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 MIR6729-201ENST00000618194 65 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 MIR6719-201ENST00000622428 87 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 AL590396.4-201ENST00000636779 956 ntBASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
VCX3AQ9NNX9 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 RNU6-1155P-201ENST00000363554 107 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 SNORD51-201ENST00000384320 80 ntBASIC2.6□□□□□ -1.99
VCX3AQ9NNX9 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms