Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC006386.2-201ENST00000624491 75 ntBASIC3.26□□□□□ -1.89
TM9SF3Q9HD45 AC012005.1-201ENST00000624575 75 ntBASIC3.26□□□□□ -1.89
TM9SF3Q9HD45 AL590396.4-201ENST00000636779 956 ntBASIC3.26□□□□□ -1.89
TM9SF3Q9HD45 AC092435.3-201ENST00000565538 3654 ntBASIC3.26□□□□□ -1.89
TM9SF3Q9HD45 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.26□□□□□ -1.89
TM9SF3Q9HD45 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC093010.3-201ENST00000570269 15214 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 RNU6-799P-201ENST00000363567 107 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 RNU6-619P-201ENST00000365146 108 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 RPS15AP38-201ENST00000413110 372 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 COTL1P1-201ENST00000422309 375 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 ATP5C1P1-201ENST00000441945 895 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 CDC42P1-201ENST00000456658 548 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 RN7SL863P-201ENST00000462370 296 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 OR5H3P-201ENST00000502817 919 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC006390.1-201ENST00000508068 283 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC048346.1-201ENST00000510247 144 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AP003049.1-201ENST00000529418 457 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC015917.1-201ENST00000579654 510 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 RN7SL622P-201ENST00000585292 275 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AL138880.2-201ENST00000616214 239 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC006249.1-201ENST00000621223 471 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 AC005858.4-201ENST00000623191 700 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 MAPK10-322ENST00000641485 4530 ntBASIC3.25□□□□□ -1.89
TM9SF3Q9HD45 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 GDI2P1-201ENST00000429312 1336 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC011460.1-201ENST00000636268 1834 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AL138885.1-201ENST00000405921 675 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC007899.1-201ENST00000412776 775 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 ATG3P1-201ENST00000419507 911 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC008264.1-201ENST00000447612 367 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AL589880.1-201ENST00000448271 287 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 NANOGNBP1-201ENST00000448444 480 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 RPS26P21-201ENST00000475397 348 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC118282.2-201ENST00000508739 374 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC109471.1-201ENST00000511631 612 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC027338.1-201ENST00000514840 825 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC104027.1-201ENST00000521887 300 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC113192.3-201ENST00000529152 742 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC024224.1-201ENST00000538284 609 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC012669.1-201ENST00000603209 283 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC026741.1-201ENST00000605892 482 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 MIR8084-201ENST00000614105 89 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AL157817.1-201ENST00000614264 790 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC138932.5-201ENST00000617759 563 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 DBF4P1-201ENST00000412976 1892 ntBASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.24□□□□□ -1.89
TM9SF3Q9HD45 AC233263.6-201ENST00000631132 1963 ntBASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 AL365361.1-201ENST00000566942 3481 ntBASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 U3.42-201ENST00000408746 214 ntBASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 MTCO1P39-201ENST00000426148 480 ntBASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 AC236972.1-201ENST00000433225 199 ntBASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 FTH1P1-201ENST00000437933 532 ntBASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 AC078857.1-201ENST00000469870 667 ntBASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 AC080014.1-201ENST00000496877 1201 ntBASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.23□□□□□ -1.89
TM9SF3Q9HD45 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms