Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD248Q9HCU0 ZNF33CP-201ENST00000432492 2030 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD248Q9HCU0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD248Q9HCU0 SNORA73.1-201ENST00000363107 205 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 Y_RNA.132-201ENST00000363421 102 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 Y_RNA.144-201ENST00000363521 113 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 RNU6-1322P-201ENST00000364309 107 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 SNORA75.4-201ENST00000391278 119 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AL122016.1-201ENST00000403365 367 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 UBE2V1P5-201ENST00000440070 405 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 RPL7P59-201ENST00000447700 943 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 TPT1P12-201ENST00000448968 492 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC132479.1-201ENST00000449160 144 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 SLC31A1P1-201ENST00000451221 567 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 SCARNA10-201ENST00000459255 330 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 RPS23P7-201ENST00000466210 444 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 MTND1P3-201ENST00000484956 952 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 RPL36AP51-201ENST00000487216 318 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC112204.1-201ENST00000502591 103 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC025674.1-201ENST00000507074 324 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 SNORA19.2-201ENST00000516013 114 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 RNU2-46P-201ENST00000517038 113 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 AP000790.1-201ENST00000528891 737 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC093012.1-202ENST00000549403 582 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC020661.2-201ENST00000560114 134 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC008638.3-201ENST00000603341 463 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC097468.3-201ENST00000607956 456 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC040896.1-201ENST00000613819 479 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 AC019206.1-201ENST00000621938 425 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD248Q9HCU0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD248Q9HCU0 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD248Q9HCU0 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD248Q9HCU0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CD248Q9HCU0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CD248Q9HCU0 LINC00561-201ENST00000565815 2738 ntBASIC4.86□□□□□ -1.63
CD248Q9HCU0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.86□□□□□ -1.63
CD248Q9HCU0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD248Q9HCU0 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC006378.2-201ENST00000623178 2476 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD248Q9HCU0 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 RPL32P3-201ENST00000359025 275 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 RNU6-451P-201ENST00000362921 107 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 Y_RNA.157-201ENST00000363638 102 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 SNORA63C-201ENST00000364578 129 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD248Q9HCU0 SNORD116-23-201ENST00000384645 92 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 U3.22-201ENST00000391120 215 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 RNA5SP397-201ENST00000391323 118 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD248Q9HCU0 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 VN1R8P-201ENST00000407739 893 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CD248Q9HCU0 OR9R1P-201ENST00000412200 877 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 RPL31P45-201ENST00000419532 356 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 AL732292.1-201ENST00000426692 226 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC133104.1-201ENST00000429100 218 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 DYNLL1P7-201ENST00000429273 258 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 MTND3P2-201ENST00000438452 342 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.85□□□□□ -1.63
CD248Q9HCU0 SEPT14P3-201ENST00000439401 183 ntBASIC4.85□□□□□ -1.63
CD248Q9HCU0 RPL23AP16-201ENST00000441715 421 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms