Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 SNORA31.26-201ENST00000517250 137 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 MIR4474-201ENST00000579189 78 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 MIR4648-201ENST00000580107 72 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 AC104763.2-201ENST00000604179 382 ntBASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
KIAA1549Q9HCM3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 HMGB1P11-201ENST00000413899 637 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC073310.1-201ENST00000423226 1033 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC005189.1-201ENST00000431286 310 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AL031663.1-201ENST00000437445 219 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 RPS15AP1-201ENST00000457423 391 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 snoU13.15-201ENST00000459407 104 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC234781.5-201ENST00000508429 271 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC112673.1-201ENST00000513168 575 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 RN7SKP244-201ENST00000516513 307 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC109635.4-202ENST00000531666 412 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 CKS1BP1-201ENST00000555221 240 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 RPL23AP78-201ENST00000599928 470 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC009220.3-201ENST00000604318 586 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC117490.2-201ENST00000610042 594 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC055764.2-201ENST00000610089 670 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AC010733.2-201ENST00000589496 5702 ntBASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.13□□□□□ -2.07
KIAA1549Q9HCM3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 RNU4-26P-201ENST00000410270 107 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 RNA5SP508-201ENST00000411327 119 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 NEK4P1-201ENST00000433383 879 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 CR769767.1-201ENST00000436337 346 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AC098799.2-201ENST00000509466 868 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AC021269.2-201ENST00000532318 330 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AC022069.1-201ENST00000582910 658 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 MTCO2P22-201ENST00000603246 681 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AP000787.2-201ENST00000604432 568 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 VIS1.1-201ENST00000610517 203 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 uc_338.9-201ENST00000617424 182 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 PABPC1P7-201ENST00000413177 1513 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 MTCO2P17-201ENST00000424336 677 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 CKS1BP5-201ENST00000434172 273 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AC129850.1-201ENST00000436203 508 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 RPL23AP20-201ENST00000447965 421 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 MRPL35P4-201ENST00000453682 566 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 MTCO3P35-201ENST00000485582 781 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AC111193.1-201ENST00000504097 155 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 XKRY-201ENST00000510392 1100 ntBASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.12□□□□□ -2.07
KIAA1549Q9HCM3 AC004925.1-201ENST00000624256 2706 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 RNU6-666P-201ENST00000363499 107 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 U8.8-201ENST00000365399 135 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 CYCSP45-201ENST00000402289 315 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 AC007064.1-201ENST00000412238 351 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 Z98742.3-201ENST00000418637 326 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 AC003685.2-201ENST00000422795 395 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 RPL23AP23-201ENST00000452590 471 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 AL035407.2-201ENST00000454090 378 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 RPS29P21-201ENST00000496272 170 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 Z99496.1-201ENST00000469424 1477 ntBASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.11□□□□□ -2.07
KIAA1549Q9HCM3 METTL21EP-201ENST00000298105 713 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 RNA5SP456-201ENST00000364002 114 ntBASIC2.1□□□□□ -2.07
KIAA1549Q9HCM3 RN7SKP192-201ENST00000411291 327 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms