Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 Y_RNA.128-201ENST00000363391 112 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 Y_RNA.159-201ENST00000363674 87 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 RNVU1-3-201ENST00000364313 161 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 RNY4P34-201ENST00000364779 95 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS11Q9H270 RNU6-1105P-201ENST00000384774 107 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 MIR559-201ENST00000385188 96 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 MIR708-201ENST00000390708 88 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS11Q9H270 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS11Q9H270 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS11Q9H270 EIF1P3-201ENST00000423841 334 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AC005517.2-201ENST00000424673 553 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AL358176.2-201ENST00000425769 204 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AL445669.1-201ENST00000426743 755 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS11Q9H270 PRPF38AP2-201ENST00000438179 851 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS11Q9H270 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AC073587.1-201ENST00000447093 876 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AC009963.2-201ENST00000453431 138 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS11Q9H270 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AC007182.2-201ENST00000489251 402 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 TMEM251P1-201ENST00000503717 318 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AC112206.3-201ENST00000514578 389 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 RNU7-30P-201ENST00000516835 62 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 RNU2-46P-201ENST00000517038 113 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 RNU6-794P-201ENST00000517261 64 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS11Q9H270 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AC141257.3-201ENST00000572906 215 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
VPS11Q9H270 AL355598.1-201ENST00000604169 202 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AC113139.1-201ENST00000605049 239 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 RNA5SP108-201ENST00000605921 117 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AC011816.2-201ENST00000607089 556 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 AC004908.2-201ENST00000609090 574 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 PISRT1-201ENST00000626175 531 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS11Q9H270 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS11Q9H270 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VPS11Q9H270 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.74□□□□□ -1.65
VPS11Q9H270 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VPS11Q9H270 AC024560.2-201ENST00000507981 1497 ntBASIC4.74□□□□□ -1.65
VPS11Q9H270 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
VPS11Q9H270 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS11Q9H270 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS11Q9H270 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS11Q9H270 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
VPS11Q9H270 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS11Q9H270 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS11Q9H270 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS11Q9H270 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS11Q9H270 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS11Q9H270 RNU1-108P-201ENST00000362556 161 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 Y_RNA.184-201ENST00000363884 108 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 SNORD82-201ENST00000365530 70 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 Y_RNA.381-201ENST00000365666 102 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
VPS11Q9H270 Y_RNA.422-201ENST00000384054 114 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 RNU6-533P-201ENST00000384144 107 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AL391361.1-201ENST00000405580 489 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 RNU6-1148P-201ENST00000410992 104 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 PIGFP2-201ENST00000421400 651 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 RPS12P5-201ENST00000423449 371 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 ISCA1P6-201ENST00000427740 390 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 USP9YP16-201ENST00000430287 407 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AC093414.1-201ENST00000434712 514 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 RPL7P54-201ENST00000438336 674 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS11Q9H270 RPL23AP20-201ENST00000447965 421 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS11Q9H270 USP9YP23-201ENST00000455085 407 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.73□□□□□ -1.65
VPS11Q9H270 RPL7AP28-201ENST00000464513 571 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 COPS8P2-201ENST00000473228 627 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AC090453.1-201ENST00000495560 436 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AC010493.1-201ENST00000513479 292 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AC093677.1-201ENST00000514414 678 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 RNA5SP216-201ENST00000516111 123 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 SCARNA21.2-201ENST00000516600 166 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 Y_RNA.711-201ENST00000516993 102 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 IGKV2D-36-201ENST00000518643 226 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS11Q9H270 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS11Q9H270 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.73□□□□□ -1.65
VPS11Q9H270 OR5B19P-201ENST00000531766 928 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS11Q9H270 MAGOH2P-202ENST00000584384 429 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AL355812.1-201ENST00000603215 216 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AC012507.3-201ENST00000603556 477 ntBASIC4.73□□□□□ -1.65
VPS11Q9H270 AC245014.2-201ENST00000603689 287 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms