Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 OR10AB1P-201ENST00000609613 938 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC093913.1-201ENST00000614178 329 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 AC009248.2-201ENST00000619826 254 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 USP9YP4-201ENST00000424401 1745 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 NUP58P1-201ENST00000502546 1738 ntBASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CNTNAP4Q9C0A0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 OR5J1P-201ENST00000313544 939 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 RNU1-14P-201ENST00000362759 152 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 RNY1P12-201ENST00000364251 105 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AC008280.1-201ENST00000418851 412 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 SRIP2-201ENST00000428470 166 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 ATP5JP1-201ENST00000431631 322 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 FAM103A2P-201ENST00000444122 354 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AL035551.1-201ENST00000446931 348 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 APOOP2-201ENST00000461561 539 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 MTCO2P29-201ENST00000465212 189 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 PABPC1P3-201ENST00000469174 459 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 TMEM248P1-201ENST00000510579 951 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AC099522.1-202ENST00000514718 367 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 RNA5SP519-201ENST00000516480 119 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 Y_RNA.691-201ENST00000516611 103 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AP000889.1-201ENST00000530968 660 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 MIR3668-201ENST00000582138 75 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AC053481.4-201ENST00000583164 216 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AC115621.1-201ENST00000604653 858 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 AL354984.3-201ENST00000604803 325 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 MIR6875-201ENST00000617506 72 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 TCP11X1-202ENST00000622971 1372 ntBASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CNTNAP4Q9C0A0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AL049780.3-201ENST00000624612 1583 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 Y_RNA.387-201ENST00000383918 102 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 SNORA20.2-201ENST00000383922 131 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 RNU6-444P-201ENST00000383988 108 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 SNORA5.1-201ENST00000384275 131 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 RPL21P65-201ENST00000406094 466 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 RN7SKP159-201ENST00000410657 292 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 RN7SKP235-201ENST00000410662 305 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AL133384.1-201ENST00000412744 351 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 RPL6P29-201ENST00000414863 865 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AC234782.4-201ENST00000417646 1048 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 SETP9-201ENST00000423837 832 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 COX6B1P7-201ENST00000430845 235 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AL356276.2-201ENST00000435919 558 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 RPL23AP74-201ENST00000437246 471 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AL358232.1-201ENST00000448030 501 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 MTCO3P2-201ENST00000457365 171 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AC090453.1-201ENST00000495560 436 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 KLHL2P1-201ENST00000508691 521 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 RNU6-1170P-201ENST00000515974 106 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 RNA5SP249-201ENST00000516127 99 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 IGKV2-23-201ENST00000518729 323 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AC023050.3-201ENST00000541142 333 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AC233309.1-201ENST00000619522 751 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AC090971.5-201ENST00000621102 293 ntBASIC5.55□□□□□ -1.52
CNTNAP4Q9C0A0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms