Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 CPS1-IT1-201ENST00000628368 2306 ntBASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 SHQ1P1-201ENST00000437111 1544 ntBASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
KRTAP4-3Q9BYR4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AF127577.6-201ENST00000623352 2191 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC078880.4-201ENST00000617627 1749 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 BRAFP1-201ENST00000445336 2703 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC245100.2-201ENST00000454544 1679 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 IARS-213ENST00000627121 4587 ntTSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 HMGB1P5-201ENST00000255320 642 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 SNORA25.1-201ENST00000362326 128 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-1229P-201ENST00000364295 107 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU4-56P-201ENST00000364700 142 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 Y_RNA.281-201ENST00000364774 94 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 Y_RNA.294-201ENST00000364916 102 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 SNORD58C-201ENST00000365223 64 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-979P-201ENST00000383896 107 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU6-418P-201ENST00000384035 107 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 SNORA16A-201ENST00000384342 137 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 MIR454-201ENST00000390180 115 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC008171.1-201ENST00000395058 200 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AL391361.1-201ENST00000405580 489 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AL390316.1-201ENST00000406279 553 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU2-29P-201ENST00000410423 189 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RN7SKP286-201ENST00000410894 299 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RNU2-6P-201ENST00000411404 190 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 TMBIM7P-201ENST00000418074 855 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AL358176.3-201ENST00000420757 454 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AL035660.1-201ENST00000422041 222 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC097713.2-201ENST00000430199 356 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC073063.1-201ENST00000434352 607 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AL731534.1-201ENST00000434711 269 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 LSM1P1-201ENST00000438629 273 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL36AP15-201ENST00000444514 266 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RAC1P7-201ENST00000445367 377 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 UQCRBP2-201ENST00000447827 297 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 ISCUP1-201ENST00000454451 448 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 RPL23AP31-201ENST00000456160 467 ntBASIC2□□□□□ -2.09
KRTAP4-3Q9BYR4 AC004129.2-201ENST00000457229 287 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms