Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SNORA2.2-201ENST00000365473 135 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 IGLV2-14-201ENST00000390312 402 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC005522.1-201ENST00000395416 346 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AL357515.1-201ENST00000402967 542 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNF37CP-201ENST00000406795 241 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 RPSAP72-201ENST00000407020 358 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR548G-201ENST00000408442 89 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 RPS26P42-201ENST00000413485 326 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 DDX39BP1-205ENST00000422507 192 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC098614.2-201ENST00000426040 255 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC091390.3-201ENST00000426478 338 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 PPP1R14D-202ENST00000427255 747 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 SNAI1P1-201ENST00000428587 777 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC022022.1-201ENST00000430304 178 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AL354761.1-201ENST00000434190 526 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC005588.1-201ENST00000439168 162 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 HMGB1P37-201ENST00000439613 609 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AP000266.1-201ENST00000450936 582 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 DBIL5P-202ENST00000453414 250 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 CREB3L2-205ENST00000458726 776 ntTSL 3 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR2113-201ENST00000459007 91 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 RPS17P2-201ENST00000461663 408 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 RPL10AP3-201ENST00000462503 651 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 RN7SL223P-201ENST00000470401 294 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 RN7SL318P-201ENST00000471955 297 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 RPS29P2-201ENST00000479278 136 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 MPTX1-201ENST00000480235 609 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 PAX8-211ENST00000497038 816 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC138866.2-201ENST00000508650 584 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AL645949.1-201ENST00000510094 324 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 GUSBP9-201ENST00000510138 584 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 SNORA18.5-201ENST00000516616 101 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 RNU6-107P-201ENST00000516643 102 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 RN7SKP282-201ENST00000516824 299 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC100860.1-201ENST00000517606 1064 ntTSL 4 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC103810.2-201ENST00000577938 559 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 APOC2-202ENST00000585786 880 ntTSL 2 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AL356280.1-201ENST00000603614 379 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AL078624.2-201ENST00000605063 554 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 uc_338.33-201ENST00000614988 170 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AL591926.8-201ENST00000616876 211 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC245028.3-201ENST00000618197 285 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 FOLR2-210ENST00000619261 1126 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC009093.6-201ENST00000622268 553 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 MIR3191-201ENST00000636300 76 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 NUDT4-206ENST00000549992 3607 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 GPR63-201ENST00000229955 5952 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AL662907.2-201ENST00000624339 3448 ntBASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC1.59□□□□□ -2.15
KRTAP4-4Q9BYR3 NFATC2IP-203ENST00000564978 2350 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 ALPK1-203ENST00000458497 5410 ntAPPRIS P3 TSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 AL591848.4-201ENST00000567832 3472 ntBASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 SYNE1-217ENST00000466159 2610 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 NF1P1-201ENST00000604105 2645 ntBASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 AC055716.2-201ENST00000552545 2441 ntBASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 LINC00294-201ENST00000631190 3306 ntBASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 RCAN1-208ENST00000482533 2686 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 AC010401.2-201ENST00000575137 4934 ntBASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 NBPF4-201ENST00000415641 2485 ntAPPRIS P2 TSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 SLAMF7-204ENST00000441662 2497 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
KRTAP4-4Q9BYR3 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms