Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SCAPERQ9BY12 AC025125.1-201ENST00000624743 1922 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 AL592437.2-201ENST00000421655 2434 ntBASIC3.29□□□□□ -1.88
SCAPERQ9BY12 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCAPERQ9BY12 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.28□□□□□ -1.88
SCAPERQ9BY12 AC009961.3-201ENST00000449832 765 ntBASIC3.28□□□□□ -1.88
SCAPERQ9BY12 AC060766.3-201ENST00000591442 263 ntBASIC3.28□□□□□ -1.88
SCAPERQ9BY12 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.28□□□□□ -1.88
SCAPERQ9BY12 VN1R7P-201ENST00000619242 903 ntBASIC3.28□□□□□ -1.88
SCAPERQ9BY12 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.28□□□□□ -1.88
SCAPERQ9BY12 AC008432.1-201ENST00000615912 1320 ntBASIC3.28□□□□□ -1.88
SCAPERQ9BY12 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SCAPERQ9BY12 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.28□□□□□ -1.88
SCAPERQ9BY12 AL118496.1-201ENST00000440201 1812 ntBASIC3.28□□□□□ -1.89
SCAPERQ9BY12 RNU6-14P-201ENST00000384630 106 ntBASIC3.27□□□□□ -1.89
SCAPERQ9BY12 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.27□□□□□ -1.89
SCAPERQ9BY12 CR769767.1-201ENST00000436337 346 ntBASIC3.27□□□□□ -1.89
SCAPERQ9BY12 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 AL512283.1-201ENST00000606756 1384 ntBASIC3.27□□□□□ -1.89
SCAPERQ9BY12 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.27□□□□□ -1.89
SCAPERQ9BY12 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 SPA17P1-201ENST00000416656 452 ntBASIC3.27□□□□□ -1.89
SCAPERQ9BY12 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.27□□□□□ -1.89
SCAPERQ9BY12 AL035551.1-201ENST00000446931 348 ntBASIC3.27□□□□□ -1.89
SCAPERQ9BY12 AC108729.3-201ENST00000513484 108 ntBASIC3.27□□□□□ -1.89
SCAPERQ9BY12 AC023043.2-201ENST00000589678 1026 ntBASIC3.27□□□□□ -1.89
SCAPERQ9BY12 AL160394.1-201ENST00000624765 724 ntBASIC3.27□□□□□ -1.89
SCAPERQ9BY12 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.26□□□□□ -1.89
SCAPERQ9BY12 FRG1BP-201ENST00000278882 761 ntBASIC3.26□□□□□ -1.89
SCAPERQ9BY12 RNU6-1140P-201ENST00000410517 106 ntBASIC3.26□□□□□ -1.89
SCAPERQ9BY12 AC108667.1-201ENST00000428618 249 ntBASIC3.26□□□□□ -1.89
SCAPERQ9BY12 RNU6-1053P-201ENST00000515930 101 ntBASIC3.26□□□□□ -1.89
SCAPERQ9BY12 AC090695.1-201ENST00000561269 1222 ntBASIC3.26□□□□□ -1.89
SCAPERQ9BY12 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.26□□□□□ -1.89
SCAPERQ9BY12 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.26□□□□□ -1.89
SCAPERQ9BY12 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.26□□□□□ -1.89
SCAPERQ9BY12 MTND5P23-201ENST00000430812 1655 ntBASIC3.26□□□□□ -1.89
SCAPERQ9BY12 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SCAPERQ9BY12 AC093909.5-201ENST00000621839 1799 ntBASIC3.25□□□□□ -1.89
SCAPERQ9BY12 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
SCAPERQ9BY12 OR5H15-201ENST00000383696 930 ntBASIC3.25□□□□□ -1.89
SCAPERQ9BY12 AC092451.1-201ENST00000480211 153 ntBASIC3.25□□□□□ -1.89
SCAPERQ9BY12 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.25□□□□□ -1.89
SCAPERQ9BY12 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.25□□□□□ -1.89
SCAPERQ9BY12 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.25□□□□□ -1.89
SCAPERQ9BY12 AC010198.2-201ENST00000550612 259 ntBASIC3.25□□□□□ -1.89
SCAPERQ9BY12 ABI1P1-201ENST00000603375 1120 ntBASIC3.25□□□□□ -1.89
SCAPERQ9BY12 AL391813.2-201ENST00000609113 322 ntBASIC3.25□□□□□ -1.89
SCAPERQ9BY12 MIR6132-201ENST00000622083 109 ntBASIC3.25□□□□□ -1.89
SCAPERQ9BY12 AC016542.2-201ENST00000624201 619 ntBASIC3.25□□□□□ -1.89
SCAPERQ9BY12 AC245100.2-201ENST00000454544 1679 ntBASIC3.24□□□□□ -1.89
SCAPERQ9BY12 AL096701.2-201ENST00000416920 238 ntBASIC3.24□□□□□ -1.89
SCAPERQ9BY12 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.24□□□□□ -1.89
SCAPERQ9BY12 AC104332.2-201ENST00000429959 156 ntBASIC3.24□□□□□ -1.89
SCAPERQ9BY12 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.24□□□□□ -1.89
SCAPERQ9BY12 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.24□□□□□ -1.89
SCAPERQ9BY12 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.24□□□□□ -1.89
SCAPERQ9BY12 TBCAP3-201ENST00000512475 312 ntBASIC3.24□□□□□ -1.89
SCAPERQ9BY12 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.24□□□□□ -1.89
SCAPERQ9BY12 AL645944.1-201ENST00000603857 493 ntBASIC3.24□□□□□ -1.89
SCAPERQ9BY12 AC004943.3-201ENST00000624116 600 ntBASIC3.24□□□□□ -1.89
SCAPERQ9BY12 AC093591.3-201ENST00000634516 308 ntBASIC3.24□□□□□ -1.89
SCAPERQ9BY12 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCAPERQ9BY12 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCAPERQ9BY12 U8.8-201ENST00000365399 135 ntBASIC3.23□□□□□ -1.89
SCAPERQ9BY12 AL139156.1-201ENST00000412785 841 ntBASIC3.23□□□□□ -1.89
SCAPERQ9BY12 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.23□□□□□ -1.89
SCAPERQ9BY12 RPL7P46-201ENST00000425129 740 ntBASIC3.23□□□□□ -1.89
SCAPERQ9BY12 AC239798.3-201ENST00000454459 408 ntBASIC3.23□□□□□ -1.89
SCAPERQ9BY12 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.23□□□□□ -1.89
SCAPERQ9BY12 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.23□□□□□ -1.89
SCAPERQ9BY12 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.23□□□□□ -1.89
SCAPERQ9BY12 AC007687.1-201ENST00000602704 304 ntBASIC3.23□□□□□ -1.89
SCAPERQ9BY12 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.23□□□□□ -1.89
SCAPERQ9BY12 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.23□□□□□ -1.89
SCAPERQ9BY12 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCAPERQ9BY12 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
SCAPERQ9BY12 VTRNA1-1-201ENST00000363120 99 ntBASIC3.22□□□□□ -1.89
SCAPERQ9BY12 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCAPERQ9BY12 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCAPERQ9BY12 MIR1287-201ENST00000408492 90 ntBASIC3.22□□□□□ -1.89
SCAPERQ9BY12 HMGN2P35-201ENST00000412164 270 ntBASIC3.22□□□□□ -1.89
SCAPERQ9BY12 AL353597.2-202ENST00000434901 373 ntBASIC3.22□□□□□ -1.89
SCAPERQ9BY12 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.22□□□□□ -1.89
SCAPERQ9BY12 AL353093.1-201ENST00000441292 436 ntBASIC3.22□□□□□ -1.89
SCAPERQ9BY12 RPS26P30-201ENST00000443431 335 ntBASIC3.22□□□□□ -1.89
SCAPERQ9BY12 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.22□□□□□ -1.89
SCAPERQ9BY12 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms