Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AP003168.1-201ENST00000530091 307 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AC010928.3-201ENST00000587712 541 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AC006116.7-201ENST00000590141 756 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AL009028.1-201ENST00000604895 802 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 HMGN2P28-201ENST00000606102 262 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AC107871.2-201ENST00000612894 502 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AL355493.4-201ENST00000618530 292 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 Z99129.2-201ENST00000619967 314 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AC106730.3-201ENST00000624568 641 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 AL512283.1-201ENST00000606756 1384 ntBASIC3.44□□□□□ -1.86
RPAP1Q9BWH6 MTCO1P4-201ENST00000520516 1409 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 Z93242.1-201ENST00000427102 353 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 HSFY3P-201ENST00000444242 1191 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 RPS26P56-201ENST00000444468 240 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 RPS15AP1-201ENST00000457423 391 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AC017037.2-201ENST00000513850 890 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 IGJP1-201ENST00000522682 475 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 FAM60DP-201ENST00000524174 632 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 HMGB1P6-201ENST00000569046 646 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AC034268.2-201ENST00000571784 482 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 MIR4435-1-201ENST00000582552 80 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 RN7SL622P-201ENST00000585292 275 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AL020991.1-201ENST00000612314 373 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AL512506.1-201ENST00000613918 449 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AC020923.1-201ENST00000624021 917 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 MIR6733-201ENST00000635723 61 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 IGHVIII-44-202ENST00000636235 289 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 AC073055.1-201ENST00000456901 1621 ntBASIC3.43□□□□□ -1.86
RPAP1Q9BWH6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 MIR9-1-201ENST00000385198 89 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AP002784.2-201ENST00000397300 549 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AL360182.1-201ENST00000397433 468 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AL035407.1-201ENST00000429211 571 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AL592437.1-201ENST00000443781 492 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC034159.1-201ENST00000513885 583 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 PRELID3BP4-201ENST00000515476 571 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC010198.2-201ENST00000550612 259 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC011611.5-201ENST00000552477 578 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC098483.2-201ENST00000603158 454 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC096947.1-201ENST00000603233 470 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC026741.1-201ENST00000605892 482 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC090115.4-201ENST00000609970 188 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC097372.4-201ENST00000625025 466 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 AC010149.2-201ENST00000637608 315 ntBASIC3.42□□□□□ -1.86
RPAP1Q9BWH6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AL592148.1-201ENST00000413568 445 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 RPL31P2-201ENST00000413849 377 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 BX664727.1-201ENST00000416024 466 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AC244098.2-201ENST00000422068 99 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AC246680.2-201ENST00000422106 389 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 SETP8-201ENST00000435341 628 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 NPM1P49-201ENST00000448027 714 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AP000857.1-201ENST00000532151 543 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AC124283.4-201ENST00000581815 456 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 OR4G1P-201ENST00000588632 938 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AC005776.1-201ENST00000603164 290 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 HSPE1P14-201ENST00000605812 302 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AL451074.6-201ENST00000608512 729 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 AC068620.4-201ENST00000636730 1182 ntBASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
RPAP1Q9BWH6 PABPC1P7-201ENST00000413177 1513 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms