Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SIN3AQ96ST3 AC104454.1-201ENST00000421341 1401 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 MIR422A-201ENST00000362286 90 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 RNU5D-1-201ENST00000363299 116 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 SNORA46-201ENST00000384762 135 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AL049545.1-201ENST00000401856 572 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 MTCO3P31-201ENST00000405526 789 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC233981.1-201ENST00000423224 461 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 ATP5F1P1-201ENST00000433775 569 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AL008629.1-201ENST00000438615 184 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 RNU6-488P-201ENST00000515918 99 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 DUXAP1-201ENST00000556632 463 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC007566.2-201ENST00000603642 413 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 AC091953.5-201ENST00000622919 233 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.38□□□□□ -1.71
SIN3AQ96ST3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SIN3AQ96ST3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 RN7SKP44-201ENST00000363602 316 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 RNU6-115P-201ENST00000364310 107 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 RNU6-146P-201ENST00000384602 108 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 SNORA48.5-201ENST00000391143 135 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 RPL23AP47-201ENST00000408017 460 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 RNU2-42P-201ENST00000410697 113 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AC092634.6-201ENST00000418558 192 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AC008280.1-201ENST00000418851 412 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 RPL7P53-201ENST00000421245 739 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 MTATP6P26-201ENST00000445926 662 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 MTCO2P25-201ENST00000447065 681 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AL034418.1-201ENST00000448675 860 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 ANKRD26P4-201ENST00000455755 950 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 S100A11P2-201ENST00000467589 312 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 RPS29P26-201ENST00000477483 171 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AC114967.1-201ENST00000504890 259 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AC079395.1-201ENST00000510981 262 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AL390838.2-201ENST00000602394 274 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 CU459211.1-201ENST00000635667 749 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 MKKS-204ENST00000639674 192 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AL353743.1-202ENST00000431724 1695 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
SIN3AQ96ST3 DBF4P1-201ENST00000412976 1892 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 AC095050.2-201ENST00000510748 1458 ntBASIC4.37□□□□□ -1.71
SIN3AQ96ST3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.36□□□□□ -1.71
SIN3AQ96ST3 RPL23AP57-201ENST00000332361 466 ntBASIC4.36□□□□□ -1.71
SIN3AQ96ST3 RNU6-805P-201ENST00000365643 106 ntBASIC4.36□□□□□ -1.71
SIN3AQ96ST3 RNU6-757P-201ENST00000410334 100 ntBASIC4.36□□□□□ -1.71
SIN3AQ96ST3 AC004022.2-201ENST00000413824 193 ntBASIC4.36□□□□□ -1.71
SIN3AQ96ST3 AL139421.1-201ENST00000423010 169 ntBASIC4.36□□□□□ -1.71
SIN3AQ96ST3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.36□□□□□ -1.71
SIN3AQ96ST3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.36□□□□□ -1.71
SIN3AQ96ST3 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.36□□□□□ -1.71
SIN3AQ96ST3 AL513175.1-201ENST00000431492 780 ntBASIC4.36□□□□□ -1.71
SIN3AQ96ST3 CYCSP32-201ENST00000440548 321 ntBASIC4.36□□□□□ -1.71
SIN3AQ96ST3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.36□□□□□ -1.71
SIN3AQ96ST3 RPL21P41-201ENST00000459863 264 ntBASIC4.36□□□□□ -1.71
SIN3AQ96ST3 AC017015.1-201ENST00000477387 286 ntBASIC4.36□□□□□ -1.71
SIN3AQ96ST3 AC093278.1-201ENST00000494700 600 ntBASIC4.36□□□□□ -1.71
SIN3AQ96ST3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.36□□□□□ -1.71
SIN3AQ96ST3 AC021146.8-201ENST00000507455 733 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms