Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 RPS3AP12-201ENST00000443616 753 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AL358794.1-201ENST00000445689 381 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC109925.1-201ENST00000478069 331 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC113347.3-201ENST00000509113 148 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC010625.1-201ENST00000511296 403 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC093331.1-201ENST00000521474 169 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AP001636.2-201ENST00000525517 696 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 TMF1P1-201ENST00000576058 373 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC011816.2-201ENST00000607089 556 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 VIS1.1-201ENST00000610517 203 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AL360181.4-201ENST00000621752 134 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 U6.101-201ENST00000637707 76 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 AC002546.1-201ENST00000588041 2504 ntBASIC3.51□□□□□ -1.85
ZNF560Q96MR9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.51□□□□□ -1.85
ZNF560Q96MR9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AL645568.2-201ENST00000432815 1337 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 DEFB109C-201ENST00000382575 264 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 DEFB109B-201ENST00000382656 264 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 RNU2-15P-201ENST00000410692 191 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 RNA5SP229-201ENST00000410809 99 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 RNU6-55P-201ENST00000411092 107 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 RNU6-954P-201ENST00000411355 107 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 VN1R51P-201ENST00000411675 945 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AL353678.1-201ENST00000422735 741 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AL590103.1-201ENST00000434488 307 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 MTND4LP10-201ENST00000435146 291 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 Z75741.1-201ENST00000446793 314 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 Z99127.3-201ENST00000448158 395 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 RFC5P1-201ENST00000454419 874 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC096751.1-202ENST00000502691 1067 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC006390.1-201ENST00000508068 283 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 RN7SKP60-201ENST00000516985 239 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 ZNF415P1-201ENST00000582279 1166 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 SNORD84-203ENST00000584275 78 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC245036.5-201ENST00000596330 847 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC012669.1-201ENST00000603209 283 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AL138478.1-201ENST00000612252 832 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC104763.3-201ENST00000613765 618 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AL442067.2-201ENST00000614033 363 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AL109620.1-201ENST00000618738 1197 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AL590240.3-201ENST00000621416 943 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 AC120349.2-201ENST00000625002 298 ntBASIC3.5□□□□□ -1.85
ZNF560Q96MR9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ZNF560Q96MR9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 MTND4P9-201ENST00000507819 1346 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 MIR30E-201ENST00000362104 92 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 SNORA40.2-201ENST00000390847 128 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 CYCSP45-201ENST00000402289 315 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 RNU2-42P-201ENST00000410697 113 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 RNU4-47P-201ENST00000410876 114 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC092447.6-201ENST00000414578 210 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 MRPS36P1-201ENST00000421291 307 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC012497.1-201ENST00000429392 575 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 CST9LP2-201ENST00000437612 320 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC108734.3-201ENST00000481241 1165 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC096571.1-202ENST00000506634 735 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC026412.2-201ENST00000512270 1075 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 FABP5P12-201ENST00000515543 389 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 RNU6-1225P-201ENST00000516336 65 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 RN7SKP31-201ENST00000516354 278 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 MIR2276-201ENST00000516886 89 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 SNORA70.24-201ENST00000517233 118 ntBASIC3.49□□□□□ -1.85
ZNF560Q96MR9 AC091163.3-201ENST00000518269 1144 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms