Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 OR4T1P-201ENST00000554933 911 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC006362.1-201ENST00000567392 174 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 AL356432.3-201ENST00000568952 465 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 COX6CP3-201ENST00000580869 223 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 AL049634.3-201ENST00000604968 457 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC012443.1-201ENST00000605605 231 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC004908.2-201ENST00000609090 574 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 AC006023.2-201ENST00000609916 167 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AL159972.1-201ENST00000625150 448 ntBASIC4.28□□□□□ -1.72
CCDC138Q96M89 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC138Q96M89 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC138Q96M89 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC138Q96M89 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC138Q96M89 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC138Q96M89 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC138Q96M89 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC138Q96M89 OR5P1P-201ENST00000299512 925 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC138Q96M89 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 RNU6-432P-201ENST00000384196 109 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 MIR19A-201ENST00000384878 82 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 SNORA40.3-201ENST00000390964 122 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AL136372.1-201ENST00000403060 228 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 RPS3AP24-201ENST00000407896 734 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 RPL7AP73-201ENST00000413490 353 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 TMSB10P2-201ENST00000416049 131 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AL807761.1-201ENST00000417622 171 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 BX890604.2-201ENST00000427883 474 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC011998.1-201ENST00000433403 117 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC090774.1-201ENST00000435925 246 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 FTH1P1-201ENST00000437933 532 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 AL033528.1-201ENST00000453780 140 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 SNORD42A-201ENST00000459584 64 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC006463.2-201ENST00000473326 348 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 ACTR3P3-201ENST00000480448 893 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 VN1R104P-201ENST00000505115 1009 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 CBX3P3-201ENST00000508108 532 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 AP003467.2-201ENST00000520175 319 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC022616.6-201ENST00000520479 119 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AP002453.2-201ENST00000533503 320 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC107016.1-201ENST00000550463 337 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC125611.2-201ENST00000551907 647 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 AL157394.1-201ENST00000562983 1224 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 MIR3690-201ENST00000580266 75 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 VN1R79P-201ENST00000593540 513 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC007687.1-201ENST00000602704 304 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AL034351.1-201ENST00000605288 668 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC121334.2-201ENST00000605387 271 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 AL359715.5-201ENST00000623431 443 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC019226.1-201ENST00000625666 515 ntBASIC4.27□□□□□ -1.73
CCDC138Q96M89 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC138Q96M89 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC138Q96M89 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC138Q96M89 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC138Q96M89 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC138Q96M89 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 RNU6-223P-201ENST00000362830 107 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 RNA5SP447-201ENST00000363749 119 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 RNU4-24P-201ENST00000364565 139 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC097374.1-203ENST00000400783 485 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC245028.1-201ENST00000423259 256 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC024082.2-201ENST00000434771 238 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 AL353706.1-201ENST00000436728 494 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 HLA-N-201ENST00000437516 135 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC138Q96M89 RPL17P49-201ENST00000443728 411 ntBASIC4.26□□□□□ -1.73
CCDC138Q96M89 RPS11P1-201ENST00000451072 473 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms