Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 NDUFA5P9-201ENST00000472609 340 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC023424.2-201ENST00000493479 777 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 NDUFB4P2-201ENST00000509515 391 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 LINC00557-201ENST00000563184 1279 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 MIR3117-201ENST00000584034 78 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AF230666.2-201ENST00000602328 725 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AL023583.1-201ENST00000607518 1143 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AL354696.1-201ENST00000614652 497 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AC006338.2-201ENST00000616864 791 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 FRG1HP-204ENST00000617940 757 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AL645937.1-201ENST00000641739 1652 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 AL022578.1-201ENST00000439330 1433 ntBASIC3.35□□□□□ -1.87
PKNOX2Q96KN3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 SNORA38-201ENST00000363946 132 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AL136372.1-201ENST00000403060 228 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 RNA5SP181-201ENST00000410246 98 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 RNA5SP274-201ENST00000410484 108 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 RAB28P1-201ENST00000411517 641 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AL158825.1-201ENST00000414735 521 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AL807761.1-201ENST00000417622 171 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC008280.1-201ENST00000418851 412 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC104389.3-201ENST00000445629 235 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC126182.1-201ENST00000478134 357 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 SETP12-201ENST00000514068 805 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 MTCO1P35-201ENST00000515270 228 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AP003102.1-201ENST00000525638 661 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC005476.1-201ENST00000554427 397 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 MIR5694-201ENST00000581190 76 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC107982.3-201ENST00000584957 985 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AL645944.1-201ENST00000603857 493 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 U3.45-201ENST00000607547 219 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AP005137.2-201ENST00000609238 400 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AL136295.6-201ENST00000610486 658 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 AC091903.1-201ENST00000624322 454 ntBASIC3.34□□□□□ -1.87
PKNOX2Q96KN3 SEC63P2-201ENST00000503863 1939 ntBASIC3.34□□□□□ -1.88
PKNOX2Q96KN3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
PKNOX2Q96KN3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 RNA5SP27-201ENST00000363839 119 ntBASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 RNU6-796P-201ENST00000391086 107 ntBASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 FNDC3CP-201ENST00000420795 1155 ntBASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 MTCO3P30-201ENST00000426425 670 ntBASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 BTBD7P2-201ENST00000441962 620 ntBASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 DYNLL1P6-201ENST00000503440 264 ntBASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 CBX3P3-201ENST00000508108 532 ntBASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 SNORA76.2-201ENST00000517095 137 ntBASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 HMGB1P6-201ENST00000569046 646 ntBASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.33□□□□□ -1.88
PKNOX2Q96KN3 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 RNU6-628P-201ENST00000410675 107 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 RNU4-72P-201ENST00000410754 173 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 AL139132.1-201ENST00000431587 344 ntBASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.32□□□□□ -1.88
PKNOX2Q96KN3 FABP5P3-201ENST00000437960 408 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms