Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SKA1Q96BD8 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.07□□□□□ -1.76
SKA1Q96BD8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
SKA1Q96BD8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SKA1Q96BD8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SKA1Q96BD8 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 AC005832.2-201ENST00000538921 1430 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SKA1Q96BD8 RNU1-18P-201ENST00000363062 164 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 RNU6-931P-201ENST00000363850 107 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 MTHFD2P2-201ENST00000407725 247 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 RNU4-6P-201ENST00000410804 122 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 PGBD4P8-201ENST00000412993 562 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AC109780.2-201ENST00000413467 845 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 Z97055.1-201ENST00000419730 712 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 MTATP6P4-201ENST00000427725 675 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 UBDP1-202ENST00000457888 382 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 RNU7-170P-201ENST00000459303 61 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AC021382.1-201ENST00000483523 359 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AP001025.2-201ENST00000490908 477 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SKA1Q96BD8 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 AL359273.1-201ENST00000510918 627 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 FAM60DP-201ENST00000524174 632 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 HIGD1AP10-201ENST00000527837 282 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 UBTFL10-201ENST00000528532 562 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 OR5AP1P-201ENST00000529730 940 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 AL354943.1-201ENST00000572103 781 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 RN7SL703P-201ENST00000578485 302 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 MIR3944-201ENST00000581277 108 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 MIR4760-201ENST00000585040 80 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AP001429.1-201ENST00000602568 530 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AL592436.1-201ENST00000605135 558 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AL158211.4-201ENST00000606988 584 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 MIR8058-201ENST00000615737 89 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SKA1Q96BD8 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 AC009039.2-201ENST00000624524 529 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SKA1Q96BD8 NCAPGP1-201ENST00000505112 1814 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
SKA1Q96BD8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SKA1Q96BD8 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SKA1Q96BD8 AC087359.1-201ENST00000508335 1740 ntBASIC4.06□□□□□ -1.76
SKA1Q96BD8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SKA1Q96BD8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
SKA1Q96BD8 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 RNU6-744P-201ENST00000365557 107 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 RNU6-1316P-201ENST00000384242 108 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 HMGN2P8-201ENST00000391458 268 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 RPS3AP24-201ENST00000407896 734 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 MIR1290-201ENST00000408735 78 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 SNORA57.3-201ENST00000411095 141 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 HMGB3P23-201ENST00000414981 585 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 HIGD1AP15-201ENST00000416198 280 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 UBE2D3P2-201ENST00000424409 445 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC018644.1-201ENST00000429934 551 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC006011.1-201ENST00000442758 349 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 RPS4XP4-201ENST00000443195 763 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 RPL17P49-201ENST00000443728 411 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 RN7SL93P-201ENST00000463035 293 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 RPL30P9-201ENST00000465586 330 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 RPL7L1P8-201ENST00000469911 741 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 MTCYBP43-201ENST00000513621 740 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC022690.1-201ENST00000526681 550 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC091516.1-201ENST00000549191 703 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 GNRHR2P1-201ENST00000555315 631 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC025627.2-201ENST00000576220 160 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 MIR3921-201ENST00000577308 85 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 VN1R92P-201ENST00000598511 928 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC022022.2-201ENST00000602989 360 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.05□□□□□ -1.76
SKA1Q96BD8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC068831.7-201ENST00000616954 363 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 AC002076.2-201ENST00000617362 122 ntBASIC4.05□□□□□ -1.76
SKA1Q96BD8 AL354798.1-201ENST00000622505 329 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms