Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 U3.42-201ENST00000408746 214 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 PIGPP2-201ENST00000411569 458 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 HMGB3P23-201ENST00000414981 585 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 SNRPEP4-201ENST00000435815 279 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 SBDSP1-204ENST00000453858 737 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 ZNF542P-204ENST00000482727 1305 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC021382.1-201ENST00000483523 359 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC093809.1-201ENST00000509155 340 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 SNORA70.16-201ENST00000516390 95 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 UBTFL10-201ENST00000528532 562 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC015726.1-201ENST00000602353 681 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AP001429.1-201ENST00000602568 530 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 MLECP1-201ENST00000615893 709 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
VPS33AQ96AX1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 SNORD113-6-201ENST00000363345 75 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 RNU6-744P-201ENST00000365557 107 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 RNU6-1316P-201ENST00000384242 108 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 SOD2P1-201ENST00000396543 562 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AL356421.1-201ENST00000403255 413 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 RPL21P65-201ENST00000406094 466 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 MIR1290-201ENST00000408735 78 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 RN7SKP266-201ENST00000410232 287 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC233728.2-201ENST00000425348 757 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 THAP5P1-201ENST00000439089 262 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC108734.1-201ENST00000439549 399 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 MTCO1P27-201ENST00000448269 226 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC006480.1-201ENST00000449887 378 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC104308.1-201ENST00000454621 333 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 U3.44-201ENST00000458938 192 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC010468.1-201ENST00000461022 817 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 RPL30P9-201ENST00000465586 330 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 MTND2P14-201ENST00000482139 351 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC026801.2-201ENST00000515352 425 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC006960.3-201ENST00000561845 705 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC055876.1-202ENST00000567053 138 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AL354943.1-201ENST00000572103 781 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AC234772.3-201ENST00000602277 528 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AL591034.3-201ENST00000605511 685 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 AL158211.4-201ENST00000606988 584 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 MIR4275-201ENST00000636486 87 ntBASIC3.56□□□□□ -1.84
VPS33AQ96AX1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS33AQ96AX1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms