Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.96□□□□□ -1.62
ERCC4Q92889 AC022790.1-201ENST00000522872 204 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC4Q92889 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
ERCC4Q92889 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.96□□□□□ -1.62
ERCC4Q92889 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.96□□□□□ -1.62
ERCC4Q92889 RPL23AP97-201ENST00000568955 471 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 HNRNPCP4-201ENST00000571636 900 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.96□□□□□ -1.62
ERCC4Q92889 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.96□□□□□ -1.62
ERCC4Q92889 AC008752.3-201ENST00000588113 712 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 BX664608.1-201ENST00000610519 487 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 AC004009.2-201ENST00000623016 728 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 AC022140.2-201ENST00000623500 188 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 AP003122.6-201ENST00000623831 495 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.96□□□□□ -1.62
ERCC4Q92889 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.96□□□□□ -1.62
ERCC4Q92889 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.96□□□□□ -1.62
ERCC4Q92889 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
ERCC4Q92889 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
ERCC4Q92889 ZNF962P-201ENST00000443465 3140 ntBASIC4.96□□□□□ -1.62
ERCC4Q92889 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ERCC4Q92889 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
ERCC4Q92889 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ERCC4Q92889 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.95□□□□□ -1.62
ERCC4Q92889 AC012618.3-205ENST00000637896 1496 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 ELL2P4-201ENST00000446870 1376 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 FRG1BP-201ENST00000278882 761 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ERCC4Q92889 RNU1-15P-201ENST00000353977 144 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 Y_RNA.38-201ENST00000362617 102 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 RNU6-181P-201ENST00000363225 107 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 RN7SKP44-201ENST00000363602 316 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 RNU4-1-201ENST00000363925 141 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 RNU1-130P-201ENST00000363930 160 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 RHOT1P2-201ENST00000366423 333 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 MT-TL1-201ENST00000386347 75 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ERCC4Q92889 RNU2-8P-201ENST00000410727 190 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 AC069218.2-201ENST00000411665 344 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.95□□□□□ -1.62
ERCC4Q92889 SAGE2P-201ENST00000420011 2126 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 MTND4P28-201ENST00000426217 387 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.95□□□□□ -1.62
ERCC4Q92889 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.95□□□□□ -1.62
ERCC4Q92889 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.95□□□□□ -1.62
ERCC4Q92889 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.95□□□□□ -1.62
ERCC4Q92889 AC007686.1-201ENST00000488511 463 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 AC011005.3-201ENST00000491624 395 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ERCC4Q92889 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.95□□□□□ -1.62
ERCC4Q92889 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.95□□□□□ -1.62
ERCC4Q92889 RNU6-445P-201ENST00000516949 107 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.95□□□□□ -1.62
ERCC4Q92889 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.95□□□□□ -1.62
ERCC4Q92889 AC025678.1-201ENST00000567861 338 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.95□□□□□ -1.62
ERCC4Q92889 MIR4270-201ENST00000581799 70 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 RPL12P25-202ENST00000598100 674 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 AC008638.3-201ENST00000603341 463 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 AC008945.2-201ENST00000606056 604 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 MIR6820-201ENST00000611508 62 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ERCC4Q92889 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.95□□□□□ -1.62
ERCC4Q92889 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
ERCC4Q92889 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ERCC4Q92889 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ERCC4Q92889 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ERCC4Q92889 AL049555.1-201ENST00000562834 1933 ntBASIC4.95□□□□□ -1.62
ERCC4Q92889 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.95□□□□□ -1.62
ERCC4Q92889 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
ERCC4Q92889 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ERCC4Q92889 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ERCC4Q92889 AL592437.2-201ENST00000421655 2434 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.94□□□□□ -1.62
ERCC4Q92889 AL161781.1-201ENST00000354277 403 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 RNU6-1085P-201ENST00000363576 107 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 Y_RNA.159-201ENST00000363674 87 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 RNU6-282P-201ENST00000365357 103 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 Y_RNA.409-201ENST00000383990 98 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 MIR513A2-201ENST00000385249 127 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ERCC4Q92889 SNORD66.1-201ENST00000391230 76 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AL583835.1-201ENST00000399570 407 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AC097374.1-203ENST00000400783 485 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.94□□□□□ -1.62
ERCC4Q92889 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.94□□□□□ -1.62
ERCC4Q92889 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.94□□□□□ -1.62
ERCC4Q92889 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.94□□□□□ -1.62
ERCC4Q92889 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.94□□□□□ -1.62
ERCC4Q92889 RPL7AP25-201ENST00000423357 805 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AC104850.1-201ENST00000435940 476 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AC105402.2-201ENST00000438503 358 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AL353748.1-201ENST00000440753 474 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 MTND4LP16-201ENST00000440828 295 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.94□□□□□ -1.62
ERCC4Q92889 MTND1P12-201ENST00000455231 147 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.94□□□□□ -1.62
ERCC4Q92889 RN7SL354P-201ENST00000469282 294 ntBASIC4.94□□□□□ -1.62
ERCC4Q92889 AC007182.2-201ENST00000489251 402 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms