Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNED1Q8TER0 RNU1-87P-201ENST00000363727 170 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 RPS3AP26-201ENST00000398259 784 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 MTCO3P41-201ENST00000414801 328 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AL356968.1-201ENST00000416622 474 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC098826.1-201ENST00000433943 471 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 MTCO2P16-201ENST00000436962 677 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC105272.1-201ENST00000438604 198 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 PTGES3P1-201ENST00000439531 483 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 HSFY3P-201ENST00000444242 1191 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC068135.1-201ENST00000446164 246 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC108938.1-201ENST00000451204 136 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 MTCO2P18-201ENST00000457151 658 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC008837.1-201ENST00000511513 412 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 MTND3P5-201ENST00000512798 333 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AP002812.4-201ENST00000532139 286 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 H3F3AP1-201ENST00000559984 334 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC090695.1-201ENST00000561269 1222 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC135628.1-201ENST00000568867 534 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC141257.3-201ENST00000572906 215 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 KC877982.1-201ENST00000602313 470 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC016877.3-201ENST00000606778 504 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC103591.3-201ENST00000608684 209 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 AC104073.3-201ENST00000610942 955 ntBASIC3.84□□□□□ -1.79
SNED1Q8TER0 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.84□□□□□ -1.79
SNED1Q8TER0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SNED1Q8TER0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SNED1Q8TER0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNED1Q8TER0 MIR30E-201ENST00000362104 92 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 RNU6-83P-201ENST00000384568 112 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 RNU2-17P-201ENST00000410290 190 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 EEF1A1P41-201ENST00000414667 207 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.83□□□□□ -1.8
SNED1Q8TER0 ELOCP9-201ENST00000418624 239 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 NUP35P1-201ENST00000422734 947 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 RPS12P5-201ENST00000423449 371 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.83□□□□□ -1.8
SNED1Q8TER0 ETF1P3-201ENST00000430422 1160 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 AC092393.1-201ENST00000439625 742 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.83□□□□□ -1.8
SNED1Q8TER0 RPL12P26-201ENST00000452430 487 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 NECAP1P2-201ENST00000455668 727 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.83□□□□□ -1.8
SNED1Q8TER0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.83□□□□□ -1.8
SNED1Q8TER0 RPL7P47-201ENST00000497299 556 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 AC010486.1-201ENST00000511793 424 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 FABP5P12-201ENST00000515543 389 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 MTND1P5-201ENST00000517906 940 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.83□□□□□ -1.8
SNED1Q8TER0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.83□□□□□ -1.8
SNED1Q8TER0 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNED1Q8TER0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNED1Q8TER0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.83□□□□□ -1.8
SNED1Q8TER0 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.83□□□□□ -1.8
SNED1Q8TER0 AC022069.1-201ENST00000582910 658 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 AL590229.1-201ENST00000603497 542 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 PRELID3BP8-201ENST00000604148 295 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 AC064872.1-201ENST00000604823 1072 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 AL034351.1-201ENST00000605288 668 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.83□□□□□ -1.8
SNED1Q8TER0 AL158163.2-201ENST00000619110 700 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 Z69908.1-201ENST00000622603 247 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 AL157770.1-201ENST00000623049 439 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNED1Q8TER0 AL049737.1-201ENST00000413920 1403 ntBASIC3.83□□□□□ -1.8
SNED1Q8TER0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SNED1Q8TER0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 Y_RNA.77-201ENST00000362962 107 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 HMGB1P10-201ENST00000395823 563 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 AC092638.1-201ENST00000411966 1275 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 AF274854.1-201ENST00000413236 615 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.82□□□□□ -1.8
SNED1Q8TER0 AL031736.2-201ENST00000426573 787 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 ISCA1P2-201ENST00000438679 421 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 MTND5P2-201ENST00000442927 1142 ntBASIC3.82□□□□□ -1.8
SNED1Q8TER0 AL360221.1-201ENST00000445989 335 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms