Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNU2-53P-201ENST00000516257 147 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 Y_RNA.680-201ENST00000516441 93 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 EDDM3DP-201ENST00000554692 434 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC138761.3-201ENST00000579993 334 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC023043.2-201ENST00000589678 1026 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC008687.2-201ENST00000597865 520 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC104662.1-201ENST00000604448 511 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC011626.1-201ENST00000604710 562 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AL022394.1-201ENST00000606979 292 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AP005432.2-201ENST00000608162 586 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 uc_338.18-201ENST00000615451 175 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AL158163.1-201ENST00000603915 1649 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 HSPA8P14-201ENST00000552265 1805 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 AC011755.1-201ENST00000623763 2049 ntBASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SHKBP1Q8TBC3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AL138820.1-201ENST00000617901 5305 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 SNORA62.1-201ENST00000364287 154 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 RNVU1-6-201ENST00000364688 164 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 RNU6-317P-201ENST00000384031 107 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 RNU6-33P-201ENST00000384793 107 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 RNA5SP241-201ENST00000391326 114 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AL360182.1-201ENST00000397433 468 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 MTCO2P33-201ENST00000402100 465 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 RSL24D1P6-201ENST00000426934 401 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC096632.1-201ENST00000427395 310 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 MTATP6P16-201ENST00000434543 526 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 MTCO3P45-201ENST00000443036 613 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 RPS29P33-201ENST00000456717 146 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC245028.2-201ENST00000458673 253 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 RN7SL189P-201ENST00000468631 289 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC098583.1-201ENST00000480875 255 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC055855.1-201ENST00000489563 579 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC022133.1-201ENST00000490961 571 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 RN7SL244P-201ENST00000493405 297 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC116655.1-201ENST00000508324 901 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 RNA5SP43-201ENST00000516559 110 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC027369.5-201ENST00000533838 755 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC128657.1-201ENST00000549459 145 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 RPL21P12-201ENST00000559810 515 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 MIR4330-201ENST00000579077 105 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC017100.2-201ENST00000584628 355 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC105254.2-201ENST00000603636 436 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AL031320.1-201ENST00000604177 357 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC098479.1-201ENST00000609225 154 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC011890.2-201ENST00000613393 294 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 uc_338.12-201ENST00000616344 181 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 uc_338.34-201ENST00000617467 174 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 CDRT1-208ENST00000630868 794 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AL732372.2-225ENST00000642124 456 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 AL731532.2-201ENST00000623542 1953 ntBASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SHKBP1Q8TBC3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SHKBP1Q8TBC3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms