Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC025016.1-201ENST00000616746 682 ntBASIC3.33□□□□□ -1.88
COL22A1Q8NFW1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.33□□□□□ -1.88
COL22A1Q8NFW1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL22A1Q8NFW1 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.33□□□□□ -1.88
COL22A1Q8NFW1 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 AC093908.1-201ENST00000623125 8092 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 ZNF355P-201ENST00000427301 3216 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 MIR181A2-201ENST00000384863 110 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 AL590004.2-201ENST00000404787 371 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 MTCO3P31-201ENST00000405526 789 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 HMGB1P48-201ENST00000446155 598 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 RPL37P6-202ENST00000464216 403 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 RN7SL297P-201ENST00000483161 293 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 AC068305.1-201ENST00000497406 726 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 KCTD9P5-201ENST00000504141 1170 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 RN7SKP282-201ENST00000516824 299 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 AGGF1P8-201ENST00000562979 1000 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 AC027104.1-201ENST00000563702 681 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 AC018754.1-201ENST00000607486 925 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 AL450489.1-201ENST00000612071 468 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 CRYM-AS1-204ENST00000637983 556 ntBASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.32□□□□□ -1.88
COL22A1Q8NFW1 NSRP1P1-201ENST00000444067 1693 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 AL133412.1-201ENST00000380194 2992 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 AC107081.1-201ENST00000414975 361 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 USP9YP5-201ENST00000511770 630 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 SNORA31.1-201ENST00000515993 133 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 SNORA31.5-201ENST00000516190 133 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 AL389895.1-201ENST00000554127 252 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 AC024595.1-201ENST00000623088 387 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 AL118508.4-201ENST00000624142 1176 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 U6.107-201ENST00000637108 79 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 FAM157B-203ENST00000639350 358 ntBASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL22A1Q8NFW1 OR5T3-201ENST00000303059 1023 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 UBE2V1P11-201ENST00000411559 285 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 NUP35P2-201ENST00000416748 943 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 ZFAND6P1-201ENST00000434138 605 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AL691517.1-201ENST00000440833 1235 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AC007000.2-201ENST00000442564 487 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 RN7SL499P-201ENST00000481141 276 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AP001086.1-201ENST00000494882 321 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AC104108.1-201ENST00000509930 412 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 RN7SKP219-201ENST00000516825 296 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 RN7SKP277-201ENST00000516895 283 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AP001004.1-201ENST00000582468 324 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AC004943.3-201ENST00000624116 600 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AL512643.1-201ENST00000635735 524 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 LRRC77P-213ENST00000637727 880 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 BTBD10P2-201ENST00000404779 676 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 MORF4L1P6-201ENST00000418771 268 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 OR51AB1P-201ENST00000429046 620 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AL592437.1-201ENST00000443781 492 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 RPS27P5-201ENST00000444247 244 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 RPL7P52-201ENST00000449200 742 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 HMGB1P25-201ENST00000468402 607 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 RPL23AP45-201ENST00000476406 468 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 RNU2-58P-201ENST00000516403 183 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 CBX3P5-201ENST00000552017 521 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 RPL23AP84-201ENST00000571193 464 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AC020658.4-201ENST00000613987 684 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 AC083865.1-201ENST00000636634 831 ntBASIC3.3□□□□□ -1.88
COL22A1Q8NFW1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL22A1Q8NFW1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL22A1Q8NFW1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL22A1Q8NFW1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL22A1Q8NFW1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL22A1Q8NFW1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms