Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RNA5SP56-201ENST00000410277 118 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 Y_RNA.608-201ENST00000410647 95 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 RNU6-195P-201ENST00000411352 109 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AL445487.1-201ENST00000415694 1580 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 SDCBPP3-201ENST00000419629 891 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 SNRPEP7-201ENST00000438350 220 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC079448.1-201ENST00000449377 373 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 HMGB3P30-201ENST00000457863 606 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC022364.2-201ENST00000457963 554 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 MEMO1P3-201ENST00000459811 302 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC090453.1-201ENST00000495560 436 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 MTCO3P9-201ENST00000506989 781 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC117522.3-201ENST00000507974 584 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 POU5F1P7-201ENST00000508759 541 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 RN7SKP276-201ENST00000516242 268 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 Y_RNA.693-201ENST00000516641 110 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC104986.1-201ENST00000517978 436 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 IGKV1-32-201ENST00000519290 311 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC090281.1-201ENST00000523019 276 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC068587.4-201ENST00000533893 186 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 CBX3P5-201ENST00000552017 521 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 PARP1P2-201ENST00000556806 195 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC053481.3-201ENST00000577881 843 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 MIR3667-201ENST00000581025 74 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 MIR4737-201ENST00000583979 81 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 MAGOH2P-202ENST00000584384 429 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC008745.1-201ENST00000604064 271 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AL035413.2-201ENST00000604801 525 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC009233.1-201ENST00000616477 371 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 RMST_9.1-201ENST00000619945 193 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AC006065.6-201ENST00000625201 545 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 MAPK10-303ENST00000641324 3959 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 OR4G11P-202ENST00000642116 1414 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 AL391684.1-202ENST00000641293 1636 ntBASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SIMC1Q8NDZ2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AL359922.3-201ENST00000624779 1670 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AC138915.3-201ENST00000562908 1389 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AP002907.1-201ENST00000606361 1430 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 U8.3-201ENST00000363321 132 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 RNU6-1085P-201ENST00000363576 107 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 MIR23A-201ENST00000385245 73 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AL590762.2-201ENST00000395798 571 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 RN7SKP100-201ENST00000411258 284 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 HMGB3P20-201ENST00000417997 600 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 ZNF90P2-204ENST00000419323 1075 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 MTCO2P5-201ENST00000422621 426 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AC006548.1-201ENST00000427470 102 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AC068287.1-201ENST00000430283 295 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 FCF1P1-201ENST00000432690 571 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 NRBF2P3-201ENST00000432731 865 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AC005154.2-201ENST00000438110 379 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 OR1H1P-201ENST00000448731 937 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 AL513533.1-201ENST00000453728 415 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 RPS23P7-201ENST00000466210 444 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 RN7SL354P-201ENST00000469282 294 ntBASIC4.41□□□□□ -1.7
SIMC1Q8NDZ2 RN7SL41P-201ENST00000476144 297 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms