Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 AC100810.6-201ENST00000638068 285 ntBASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 MUC2-202ENST00000613187 4845 ntBASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 AL592182.3-201ENST00000642132 3304 ntBASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 NUP58P1-201ENST00000502546 1738 ntBASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LINC00116Q8NCU8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AC104623.2-202ENST00000623477 4002 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 RNU5E-1-201ENST00000362477 120 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 Y_RNA.157-201ENST00000363638 102 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 Y_RNA.326-201ENST00000365176 113 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 RNU6-730P-201ENST00000383954 104 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 Y_RNA.419-201ENST00000384041 102 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AL031679.1-201ENST00000400616 525 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AL078604.1-201ENST00000404609 466 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 RNU4-6P-201ENST00000410804 122 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 RAB9AP3-201ENST00000412737 573 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AL365400.1-201ENST00000431854 640 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AL606489.2-201ENST00000433886 234 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 KCTD9P3-201ENST00000434597 1169 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 BNIP3P2-201ENST00000441221 577 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 RAB9AP1-201ENST00000449393 573 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AL133244.1-201ENST00000456007 258 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 MTCO3P2-201ENST00000457365 171 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 RNU6-835P-201ENST00000516974 104 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 LARP7P2-201ENST00000575306 125 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AC243960.4-201ENST00000600532 288 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AC012468.1-201ENST00000604888 430 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AL162730.1-201ENST00000605734 292 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 DISC2.1-201ENST00000612827 205 ntBASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.41□□□□□ -1.54
LINC00116Q8NCU8 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC083837.1-201ENST00000565297 2994 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC016588.2-201ENST00000632484 3021 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AP005435.3-201ENST00000531260 3198 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC010300.1-201ENST00000600671 5134 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 SNORA69-201ENST00000383895 132 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 SNORA5.1-201ENST00000384275 131 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 RPS4XP8-201ENST00000402039 771 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 PRRC2CP1-201ENST00000404428 159 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 SNORA74C-2-201ENST00000411179 201 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 RNU6-373P-201ENST00000411247 98 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 MTCO2P5-201ENST00000422621 426 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC019097.1-201ENST00000424783 735 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 MTCO2P12-201ENST00000427426 682 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 RPL23AP83-201ENST00000434984 473 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 CBWD4P-201ENST00000445695 655 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC005229.2-201ENST00000456995 399 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC104563.1-201ENST00000476147 376 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AP001025.2-201ENST00000490908 477 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC093278.1-201ENST00000494700 600 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 NIPA2P2-201ENST00000496376 1083 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 RNA5SP360-201ENST00000516555 118 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 SOD1P3-201ENST00000518682 454 ntBASIC5.4□□□□□ -1.54
LINC00116Q8NCU8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms