Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 RPS24P6-201ENST00000452670 400 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC007967.1-201ENST00000455422 1159 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC010460.1-201ENST00000507087 466 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 RNY4P37-201ENST00000516225 96 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC104986.1-201ENST00000517978 436 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 RAB9BP1-201ENST00000519581 626 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC125611.1-201ENST00000549563 229 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC022662.1-201ENST00000580252 331 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC131235.4-201ENST00000609288 620 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC092106.3-201ENST00000611308 722 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC109809.1-201ENST00000619665 545 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AL354798.1-201ENST00000622505 329 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AL356863.1-201ENST00000623378 1080 ntBASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CCDC71LQ8N9Z2 CDR1-202ENST00000625883 1485 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 RPL32P23-201ENST00000397237 405 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 RNU6-1077P-201ENST00000410506 102 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 RAB28P1-201ENST00000411517 641 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 RPS7P15-201ENST00000415804 584 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 HIGD1AP15-201ENST00000416198 280 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 MTCO3P12-201ENST00000416718 547 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 ELOCP9-201ENST00000418624 239 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AL050321.1-201ENST00000432363 400 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 HMGB3P11-201ENST00000440127 604 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AL591719.1-201ENST00000444669 744 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 MTCO2P25-201ENST00000447065 681 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AL445669.2-201ENST00000454425 421 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC017015.1-201ENST00000477387 286 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 RN7SL459P-201ENST00000481078 302 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 HMGB1P28-201ENST00000507778 552 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC116353.3-201ENST00000511215 249 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 RNA5SP217-201ENST00000515959 91 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 EEF1B2P4-201ENST00000551398 348 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC061975.8-201ENST00000587058 721 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 VIS1.1-201ENST00000610517 203 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 MLECP1-201ENST00000615893 709 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC011330.2-201ENST00000621680 635 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC090617.7-201ENST00000623952 126 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC116618.1-201ENST00000634617 774 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 AC244517.1-201ENST00000606030 2086 ntBASIC2.84□□□□□ -1.95
CCDC71LQ8N9Z2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC71LQ8N9Z2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC71LQ8N9Z2 MTND5P7-201ENST00000413558 1798 ntBASIC2.84□□□□□ -1.96
CCDC71LQ8N9Z2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
CCDC71LQ8N9Z2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
CCDC71LQ8N9Z2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 SPRR2C-201ENST00000290702 219 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AL121657.1-201ENST00000327215 531 ntBASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
CCDC71LQ8N9Z2 RNU6-1074P-201ENST00000383995 104 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms