Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 LRRC34P1-201ENST00000542742 915 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AL391156.1-201ENST00000554965 554 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 MIR4474-201ENST00000579189 78 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 MIR4444-1-201ENST00000581696 74 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 MIR4444-2-201ENST00000584390 74 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC067852.3-201ENST00000589177 561 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AL109653.1-201ENST00000603091 248 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC009237.15-201ENST00000610252 501 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AL110115.1-201ENST00000614396 364 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 AC079395.3-201ENST00000615161 484 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 U7.8-201ENST00000619968 63 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 OR8B1P-202ENST00000641132 1178 ntBASIC3.54□□□□□ -1.84
RTL3Q8N8U3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTL3Q8N8U3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 RNA5SP119-201ENST00000362715 117 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 RNU6-216P-201ENST00000363282 104 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 MIR513B-201ENST00000385136 84 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 SNORA48.7-201ENST00000391302 135 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 OR4K6P-201ENST00000416478 897 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AL137014.1-201ENST00000420490 1226 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 MRPS36P1-201ENST00000421291 307 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 GTF2IP23-201ENST00000423746 351 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AL158071.1-201ENST00000430315 461 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AL050321.1-201ENST00000432363 400 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC084290.1-201ENST00000434995 374 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 NANOGP2-201ENST00000435391 727 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 MTND1P26-201ENST00000440488 538 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 VN1R34P-201ENST00000447387 883 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 RPL39P6-201ENST00000448289 150 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 RNU7-170P-201ENST00000459303 61 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 MTCO2P6-201ENST00000463134 685 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC108734.3-201ENST00000481241 1165 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 RPL12P22-201ENST00000519073 490 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC007458.1-201ENST00000542812 373 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AL163153.1-201ENST00000554223 283 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 MIR4429-201ENST00000580105 73 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC006557.5-201ENST00000603126 811 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 Z99289.3-201ENST00000605586 594 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC106028.5-201ENST00000610332 395 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC087683.2-201ENST00000611384 326 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AP000676.4-201ENST00000624659 623 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AC097655.1-201ENST00000635075 318 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 AL356274.2-201ENST00000624379 3752 ntBASIC3.53□□□□□ -1.84
RTL3Q8N8U3 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTL3Q8N8U3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AL513302.2-201ENST00000562313 1842 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 OR5H2-201ENST00000355273 945 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 RNU5D-1-201ENST00000363299 116 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 RNU4-92P-201ENST00000363783 136 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 RNU4-68P-201ENST00000364314 141 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AL356320.2-201ENST00000417263 507 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 Z75741.2-201ENST00000417272 1167 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 BX842559.1-201ENST00000419615 532 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 MTCO2P21-201ENST00000419780 677 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 RPL21P32-201ENST00000419877 477 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC019178.2-201ENST00000423595 505 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 MTCYBP31-201ENST00000438855 1122 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 MTCYBP34-201ENST00000439552 670 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RTL3Q8N8U3 RPL17P49-201ENST00000443728 411 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC068587.2-201ENST00000478386 781 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 RPL23AP44-201ENST00000482216 473 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 AC093278.1-201ENST00000494700 600 ntBASIC3.52□□□□□ -1.85
RTL3Q8N8U3 MTCYBP16-201ENST00000509187 1129 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms