Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RN7SL714P-201ENST00000487050 298 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AC104564.1-201ENST00000493028 407 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 SNRPGP16-201ENST00000533275 226 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 HSBP1P1-201ENST00000555205 166 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 MIR548AC-201ENST00000585049 88 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AC004805.3-201ENST00000603178 310 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 MIR6071-201ENST00000616741 78 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 AC073869.8-201ENST00000641806 335 ntBASIC5.65□□□□□ -1.5
DEPDC4Q8N2C3 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
DEPDC4Q8N2C3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC022893.2-201ENST00000564832 3296 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AL161756.3-201ENST00000641216 2071 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 Y_RNA.106-201ENST00000363189 100 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 RN7SKP128-201ENST00000364270 303 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 RNU6-450P-201ENST00000364654 107 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 Y_RNA.307-201ENST00000365022 117 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 RNU6-356P-201ENST00000384140 107 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 SNORA51.8-201ENST00000384234 132 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 MIR153-1-201ENST00000384914 90 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 RPL12P23-201ENST00000405880 490 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AL080315.1-201ENST00000406055 466 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 HSPE1P8-201ENST00000406997 288 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC119751.6-201ENST00000416712 186 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 UBE2D3P2-201ENST00000424409 445 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 HMGB1P9-201ENST00000429856 646 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC073910.1-201ENST00000445047 438 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 OSTCP8-201ENST00000445117 448 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 HSFY6P-201ENST00000445573 403 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AL162739.1-201ENST00000450606 307 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 Z83838.1-202ENST00000456225 839 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 RN7SL552P-201ENST00000462094 276 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC104339.1-201ENST00000465478 348 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 FTH1P2-201ENST00000466086 412 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC009120.1-201ENST00000493458 473 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 RN7SL284P-201ENST00000498823 275 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC093852.1-201ENST00000503587 266 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 GMPSP1-201ENST00000514075 579 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 RNU6-927P-201ENST00000516199 100 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC011853.1-201ENST00000518911 454 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC009643.1-201ENST00000532030 391 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 TPRX1P1-201ENST00000557620 319 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC026956.1-201ENST00000558741 396 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 SNORD91B-202ENST00000608459 222 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 AC034102.8-201ENST00000615146 484 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 MIR8062-201ENST00000621515 85 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 LINC02495-203ENST00000636704 242 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 SDAD1P2-201ENST00000441308 2028 ntBASIC5.64□□□□□ -1.51
DEPDC4Q8N2C3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 BCORP1-203ENST00000513194 5093 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 MTND5P7-201ENST00000413558 1798 ntBASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.63□□□□□ -1.51
DEPDC4Q8N2C3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms