Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 RNA5SP399-201ENST00000364003 117 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 RNU6-730P-201ENST00000383954 104 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 RNU1-89P-201ENST00000384592 164 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 SNORA3C-201ENST00000408792 125 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AC091286.1-201ENST00000431233 461 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 USP9YP7-201ENST00000436723 430 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 SNRPEP7-201ENST00000438350 220 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AL117351.1-201ENST00000438864 766 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 RPL36AP33-201ENST00000450395 310 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 USP9YP32-201ENST00000452432 430 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 HMGN2P7-201ENST00000456186 273 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AC026403.1-201ENST00000518938 295 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 OR6C7P-201ENST00000547875 934 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 CCNG2P1-201ENST00000549521 1000 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 PCMTD1P2-201ENST00000565017 355 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 MIR5186-201ENST00000577504 120 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AC087499.8-201ENST00000578406 226 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AC007566.2-201ENST00000603642 413 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AP003117.2-201ENST00000606010 545 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AL031775.1-201ENST00000607014 887 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AL391497.1-201ENST00000608671 547 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.22□□□□□ -1.73
VPS52Q8N1B4 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VPS52Q8N1B4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.21□□□□□ -1.73
VPS52Q8N1B4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VPS52Q8N1B4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
VPS52Q8N1B4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 MAPK10-373ENST00000641983 6772 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 SNORA5A-201ENST00000384111 134 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC004987.3-201ENST00000413879 771 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 CYCSP46-201ENST00000423569 204 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 COX6CP2-201ENST00000444980 225 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 MTCO1P27-201ENST00000448269 226 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 CEACAMP4-201ENST00000457676 421 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 RPL31P50-201ENST00000471002 296 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC069499.1-201ENST00000489433 509 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 Y_RNA.655-201ENST00000515919 96 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 MIR2114-201ENST00000516645 80 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC060788.1-201ENST00000521318 469 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 GTF2IP22-201ENST00000554443 182 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC141257.3-201ENST00000572906 215 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC012557.2-201ENST00000605919 418 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AL451064.1-201ENST00000607718 471 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC012360.2-201ENST00000609349 391 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC012314.7-201ENST00000619693 93 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC009093.8-201ENST00000641769 292 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC024560.2-201ENST00000507981 1497 ntBASIC4.21□□□□□ -1.74
VPS52Q8N1B4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VPS52Q8N1B4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AL133383.2-201ENST00000622958 2336 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 RNU6-501P-201ENST00000364072 100 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 RNU6-952P-201ENST00000391164 108 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 RPL21P17-201ENST00000397467 475 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 RN7SKP266-201ENST00000410232 287 ntBASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.2□□□□□ -1.74
VPS52Q8N1B4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms