Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AL356806.1-201ENST00000422524 916 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 MTATP6P11-201ENST00000428071 670 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 RNU6-599P-201ENST00000459383 107 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 RNU6-1193P-201ENST00000459461 107 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 RN7SKP60-201ENST00000516985 239 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 RNU6-368P-201ENST00000620928 107 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 RNU6-538P-201ENST00000622329 107 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AC091953.2-201ENST00000623979 160 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 AC093536.2-201ENST00000565257 1406 ntBASIC1.47□□□□□ -2.17
CSMD3Q7Z407 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CSMD3Q7Z407 NCSTNP1-201ENST00000406229 144 ntBASIC1.46□□□□□ -2.17
CSMD3Q7Z407 RNA5SP129-201ENST00000410276 118 ntBASIC1.46□□□□□ -2.17
CSMD3Q7Z407 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.46□□□□□ -2.17
CSMD3Q7Z407 MTCO2P17-201ENST00000424336 677 ntBASIC1.46□□□□□ -2.17
CSMD3Q7Z407 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.46□□□□□ -2.17
CSMD3Q7Z407 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.46□□□□□ -2.17
CSMD3Q7Z407 CEACAMP4-201ENST00000457676 421 ntBASIC1.46□□□□□ -2.17
CSMD3Q7Z407 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.17
CSMD3Q7Z407 XKRY-201ENST00000510392 1100 ntBASIC1.46□□□□□ -2.17
CSMD3Q7Z407 RNA5SP490-201ENST00000517141 136 ntBASIC1.46□□□□□ -2.17
CSMD3Q7Z407 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.46□□□□□ -2.17
CSMD3Q7Z407 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.46□□□□□ -2.17
CSMD3Q7Z407 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.46□□□□□ -2.17
CSMD3Q7Z407 AC084035.1-201ENST00000634543 607 ntBASIC1.46□□□□□ -2.17
CSMD3Q7Z407 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 DCAF13P1-201ENST00000495256 1330 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 U8.10-201ENST00000384260 133 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 MTCO3P31-201ENST00000405526 789 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 LINC00888-204ENST00000487386 421 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 RPL38P4-201ENST00000502376 214 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 AC034244.1-201ENST00000507687 207 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 snoZ278.1-201ENST00000517059 112 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 AGGF1P8-201ENST00000562979 1000 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 OR5H15-201ENST00000383696 930 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 AC003989.2-201ENST00000440224 169 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 RPL21P18-201ENST00000469899 480 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 AP003467.2-201ENST00000520175 319 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 AC105137.2-201ENST00000569073 466 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 LRRC77P-213ENST00000637727 880 ntBASIC1.46□□□□□ -2.18
CSMD3Q7Z407 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.46□□□□□ -2.18
CSMD3Q7Z407 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AL590084.1-201ENST00000407885 387 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 MTND6P18-201ENST00000439477 513 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AC022431.1-201ENST00000450941 438 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 PDCD5P1-201ENST00000543528 309 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AC055876.1-202ENST00000567053 138 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AC022709.1-201ENST00000615967 87 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 Z99129.2-201ENST00000619967 314 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 XPOTP1-201ENST00000443317 2398 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AP005901.5-201ENST00000545779 1796 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 Y_RNA.178-201ENST00000363832 102 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 SNORD6-201ENST00000365444 73 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 SAR1AP2-201ENST00000392696 594 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AL353597.2-202ENST00000434901 373 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AL445669.2-201ENST00000454425 421 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 RPS29P12-201ENST00000460178 152 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 RN7SL297P-201ENST00000483161 293 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 LTV1P1-201ENST00000510683 1237 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 MIR6895-201ENST00000613497 78 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AC131280.1-202ENST00000624067 4211 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AP000275.1-201ENST00000411943 390 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 CD24P2-201ENST00000565486 219 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.45□□□□□ -2.18
CSMD3Q7Z407 AC009831.4-201ENST00000620744 325 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 ANKRD62P1-201ENST00000434304 1623 ntBASIC1.45□□□□□ -2.18
CSMD3Q7Z407 RNU6-392P-201ENST00000364926 101 ntBASIC1.44□□□□□ -2.18
CSMD3Q7Z407 Y_RNA.354-201ENST00000365448 111 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms