Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC145350.1-201ENST00000567426 208 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 MIR3186-201ENST00000577404 85 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 COX6CP3-201ENST00000580869 223 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AL357080.1-201ENST00000617394 239 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC131159.1-201ENST00000621854 213 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC079228.1-201ENST00000624774 1049 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 AP000526.1-201ENST00000603308 1388 ntBASIC3.59□□□□□ -1.83
NUP54Q7Z3B4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
NUP54Q7Z3B4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NUP54Q7Z3B4 MAPK10-362ENST00000641864 4484 ntBASIC3.59□□□□□ -1.84
NUP54Q7Z3B4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NUP54Q7Z3B4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NUP54Q7Z3B4 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.59□□□□□ -1.84
NUP54Q7Z3B4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NUP54Q7Z3B4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 CUL1P1-201ENST00000509510 2425 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 RNU5A-2P-201ENST00000384337 116 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AL031679.1-201ENST00000400616 525 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AL049545.1-201ENST00000401856 572 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 RPS15AP38-201ENST00000413110 372 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 MTATP6P27-201ENST00000416987 621 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 VPS26BP1-201ENST00000417155 755 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 RPL7P30-201ENST00000420888 709 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 MTCO2P5-201ENST00000422621 426 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC092017.2-201ENST00000427600 362 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 RPL7P2-201ENST00000427639 268 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 MTND5P25-201ENST00000430499 799 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 CETN4P-201ENST00000432407 469 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 RPL23AP35-201ENST00000451906 501 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 FAM172BP-201ENST00000487497 1089 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC026726.1-201ENST00000512859 601 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 RNA5SP164-201ENST00000516533 110 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 SNORD59.2-201ENST00000516873 68 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC239860.2-201ENST00000525886 270 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 ISCA1P3-201ENST00000577104 373 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC020914.6-201ENST00000594327 272 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC006539.2-201ENST00000601729 572 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC015726.1-201ENST00000602353 681 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC021171.1-201ENST00000603137 706 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC008962.1-201ENST00000605729 304 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 HMGB1P50-201ENST00000605814 607 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AL607023.1-201ENST00000620045 248 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC092628.2-201ENST00000622492 339 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AL354798.1-201ENST00000622505 329 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AL356585.4-201ENST00000623078 1229 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AC120349.3-201ENST00000624377 529 ntBASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NUP54Q7Z3B4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 RN7SKP280-201ENST00000364196 304 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 RNU6-1200P-201ENST00000384162 107 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 MIR199A2-201ENST00000385289 110 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AF228730.1-201ENST00000397972 663 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 HLFP1-201ENST00000402375 499 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 RN7SKP56-201ENST00000410513 331 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AC007742.1-201ENST00000425789 329 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 MTATP6P17-201ENST00000431030 672 ntBASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.57□□□□□ -1.84
NUP54Q7Z3B4 ELOCP26-201ENST00000436067 329 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms