Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNU6-566P-201ENST00000516790 107 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 RNU6-988P-201ENST00000519081 107 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 RPL23AP53-201ENST00000521854 457 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 AL133271.1-201ENST00000538229 291 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 AC069307.1-201ENST00000602820 447 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 AL670379.11-201ENST00000604059 253 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 CYP2C61P-201ENST00000604072 290 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 SUMO2P15-201ENST00000604285 278 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 AL670379.10-201ENST00000604330 253 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 AL670379.12-201ENST00000605291 253 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 AL670379.9-201ENST00000605428 253 ntBASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
RNF111Q6ZNA4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 CISD1P1-201ENST00000393907 327 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 HMGB3P22-202ENST00000451823 572 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 RPS26P39-201ENST00000469206 341 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AC022034.3-201ENST00000471393 478 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 COPS8P2-201ENST00000473228 627 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 UBA52P7-201ENST00000486088 380 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 RPS21P4-201ENST00000487122 248 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AC073073.1-201ENST00000493920 463 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AC025164.1-201ENST00000496249 478 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 COX7A2P2-201ENST00000505291 250 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 PGAM1P13-201ENST00000507497 754 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 FAM60DP-201ENST00000524174 632 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 DEFB109D-201ENST00000529497 240 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AL133153.1-201ENST00000557756 303 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 MIR3668-201ENST00000582138 75 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AC006272.2-201ENST00000594725 163 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 Z82243.1-201ENST00000609432 473 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 RMST_9.1-201ENST00000619945 193 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 AL672167.1-205ENST00000641112 3080 ntBASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RNF111Q6ZNA4 Z95331.1-201ENST00000623075 23112 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 SNORD113-7-201ENST00000363762 77 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 RNU6-188P-201ENST00000364207 107 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 RNU2-21P-201ENST00000410368 188 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC114491.1-201ENST00000416095 246 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AL355433.1-201ENST00000422804 300 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 BRWD1P3-201ENST00000428816 390 ntBASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF111Q6ZNA4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms